RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 C11orf16Q9NQ32 467 aa14.13□□□□□ -0.15
AMBRA1-207ENST00000529553 FPGT-TNNI3KV9GXZ4 949 aa14.13□□□□□ -0.15
AMBRA1-207ENST00000529553 SMCHD1A6NHR9 2005 aa14.13□□□□□ -0.15
AMBRA1-207ENST00000529553 FOCADQ5VW36 1801 aa14.13□□□□□ -0.15
AMBRA1-207ENST00000529553 PLXNA1Q9UIW2 1896 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 SMIM22K7EJ46 135 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 VWA5AO00534 786 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 IDH1O75874 414 aaKnown RBP14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 CABYRO75952 493 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 GNAI2P04899 355 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 C6orf222P0C671 652 aaPredicted RBP14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 OTOP2Q7RTS6 562 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 MAGEB6Q8N7X4 407 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 HLA-CQ95604 372 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 ABHD16BQ9H3Z7 469 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 HIPK3Q9H422 1215 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 SWAP70Q9UH65 585 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 CHD7Q9P2D1 2997 aa14.12□□□□□ -0.15
AMBRA1-207ENST00000529553 DNAJC25-GNG10A0A024R161 153 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 A0A0G2JMZ2 1700 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 MYADML2A6NDP7 307 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 RABGGTBP53611 331 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 MYO9BQ13459 2157 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 SPICE1Q8N0Z3 855 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 DDX11Q96FC9 970 aa14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 RIOK1Q9BRS2 568 aaKnown RBP14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 ZNF214Q9UL59 606 aaPredicted RBP14.11□□□□□ -0.15
AMBRA1-207ENST00000529553 PNMA6EA0A0J9YXQ4 647 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 PRR33A8MZF0 331 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 PFKMP08237 780 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 ATP2A2P16615 1042 aaKnown RBP14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 TMEM67Q5HYA8 995 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 FAM9BQ8IZU0 186 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 REPS2Q8NFH8 660 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 CCDC17Q96LX7 622 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 MCM9Q9NXL9 1143 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 ZHX1Q9UKY1 873 aaPredicted RBP14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 PPP1R9AQ9ULJ8 1098 aa14.1□□□□□ -0.15
AMBRA1-207ENST00000529553 MYOGP15173 224 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 ICA1Q05084 483 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 CCDC144BQ3MJ40 725 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 SNX27Q96L92 541 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 CRNKL1Q9BZJ0 848 aaKnown RBP14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 KCNH6Q9H252 994 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 CDK5RAP2Q96SN8 1893 aa14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 TCF20Q9UGU0 1960 aaKnown RBP14.09□□□□□ -0.15
AMBRA1-207ENST00000529553 MAGEB6P1A0A0J9YX57 407 aa14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 CTAGE5O15320 804 aa14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 ANP32CO43423 234 aa14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 TRMT2AQ8IZ69 625 aaKnown RBP14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 PHOSPHO2Q8TCD6 241 aa14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 KHSRPQ92945 711 aaKnown RBP eCLIP14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 NOC4LQ9BVI4 516 aaKnown RBP14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 TEX13BQ9BXU2 312 aa14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.08□□□□□ -0.16
AMBRA1-207ENST00000529553 MUC6Q6W4X9 2439 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 ATP2A1O14983 1001 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 MRE11P49959 708 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 CCL23P55773 120 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 IRX5P78411 483 aaPredicted RBP14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 ITGA7Q13683 1181 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 KANSL2Q9H9L4 492 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 GOPCQ9HD26 462 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 FBXO28Q9NVF7 368 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 LMCD1Q9NZU5 365 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 DBNLQ9UJU6 430 aaKnown RBP14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 MYH1P12882 1939 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 REV3LO60673 3130 aa14.07□□□□□ -0.16
AMBRA1-207ENST00000529553 TRANK1O15050 2925 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 FAM86C2PA6NEL3 165 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 ZBBXA8MT70 800 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 RFXAPO00287 272 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 ADCY6O43306 1168 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 ZEB2O60315 1214 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 CA3P07451 260 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 AKR1B1P15121 316 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 OS9Q13438 667 aaPredicted RBP14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 POLA2Q14181 598 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 VWCEQ96DN2 955 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 AGBL1Q96MI9 1066 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 DCP1AQ9NPI6 582 aaPredicted RBP14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 UMODL1Q5DID0 1318 aa14.06□□□□□ -0.16
AMBRA1-207ENST00000529553 ZNFX1Q9P2E3 1918 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 EEF2P13639 858 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 ALADP13716 330 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 SNRNP48Q6IEG0 339 aaKnown RBP14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 SSH3Q8TE77 659 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 SLC9A7Q96T83 725 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 WNT8AQ9H1J5 351 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 ANTXR1Q9H6X2 564 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 FBXO40Q9UH90 709 aa14.05□□□□□ -0.16
AMBRA1-207ENST00000529553 KIF28PB7ZC32 967 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 SURF6O75683 361 aaKnown RBP14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 SUPT20HL2P0C7V6 817 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 ACTN1P12814 892 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 ATP8B2P98198 1209 aa14.04□□□□□ -0.16
AMBRA1-207ENST00000529553 TNFAIP2Q03169 654 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms