RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 ZHX1Q9UKY1 873 aaPredicted RBP22.96■■□□□ 1.27
SSRP1-204ENST00000529002 ZNF214Q9UL59 606 aaPredicted RBP22.96■■□□□ 1.27
SSRP1-204ENST00000529002 CHD9Q3L8U1 2897 aa22.95■■□□□ 1.27
SSRP1-204ENST00000529002 RAD21O60216 631 aa22.95■■□□□ 1.26
SSRP1-204ENST00000529002 EEF2P13639 858 aaKnown RBP22.95■■□□□ 1.26
SSRP1-204ENST00000529002 CDK7P50613 346 aa22.95■■□□□ 1.26
SSRP1-204ENST00000529002 VTI1AQ96AJ9 217 aa22.95■■□□□ 1.26
SSRP1-204ENST00000529002 EXOC6BQ9Y2D4 811 aa22.95■■□□□ 1.26
SSRP1-204ENST00000529002 TCRBV5S4A2TA0A5A2 114 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 MOXD2PA6NHM9 499 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 CYP2C18P33260 490 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 FAM83BQ5T0W9 1011 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 FAM122AQ96E09 287 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 SWAP70Q9UH65 585 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 FAM184BQ9ULE4 1060 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 PPP1R9AQ9ULJ8 1098 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 YBX2Q9Y2T7 364 aaKnown RBP22.94■■□□□ 1.26
SSRP1-204ENST00000529002 RIPK3Q9Y572 518 aa22.94■■□□□ 1.26
SSRP1-204ENST00000529002 APBB1O00213 710 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 ASGR1P07306 291 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 C6orf222P0C671 652 aaPredicted RBP22.93■■□□□ 1.26
SSRP1-204ENST00000529002 SLC4A3P48751 1232 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 CDK8P49336 464 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 NUP88Q99567 741 aaPredicted RBP22.93■■□□□ 1.26
SSRP1-204ENST00000529002 SH2D4AQ9H788 454 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 IL1RAPL2Q9NP60 686 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 BDP1A6H8Y1 2624 aa22.93■■□□□ 1.26
SSRP1-204ENST00000529002 PRRC2BQ5JSZ5 2229 aaKnown RBP22.92■■□□□ 1.26
SSRP1-204ENST00000529002 GLT1D1Q96MS3 346 aa22.92■■□□□ 1.26
SSRP1-204ENST00000529002 REV3LO60673 3130 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 UMODL1Q5DID0 1318 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 GOLIM4O00461 696 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 DUSP11O75319 330 aaKnown RBP22.91■■□□□ 1.26
SSRP1-204ENST00000529002 CHGBP05060 677 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 FAM126BQ8IXS8 530 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 MICALL1Q8N3F8 863 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 TMEM199Q8N511 208 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 DNAJC2Q99543 621 aaKnown RBP22.91■■□□□ 1.26
SSRP1-204ENST00000529002 BCL11AQ9H165 835 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 MSRAQ9UJ68 235 aa22.91■■□□□ 1.26
SSRP1-204ENST00000529002 CHD7Q9P2D1 2997 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 ELP1O95163 1332 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 ARVCFO00192 962 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 RABGGTBP53611 331 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 TFF2Q03403 129 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 ZKSCAN2Q63HK3 967 aa22.9■■□□□ 1.26
SSRP1-204ENST00000529002 SNRNP48Q6IEG0 339 aaKnown RBP22.9■■□□□ 1.26
SSRP1-204ENST00000529002 TMED8Q6PL24 325 aaPredicted RBP22.9■■□□□ 1.26
SSRP1-204ENST00000529002 MROH7Q68CQ1 1323 aa22.89■■□□□ 1.26
SSRP1-204ENST00000529002 SYNGAP1Q96PV0 1343 aa22.89■■□□□ 1.26
SSRP1-204ENST00000529002 DNAJC25-GNG10A0A024R161 153 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 MBD4O95243 580 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 MYOGP15173 224 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 CST5P28325 142 aaPredicted RBP22.89■■□□□ 1.25
SSRP1-204ENST00000529002 C12orf60Q5U649 245 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 PSRC1Q6PGN9 363 aaPredicted RBP22.89■■□□□ 1.25
SSRP1-204ENST00000529002 MAMDC4Q6UXC1 1216 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 IL27Q8NEV9 243 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 HERVK_113Q902F9 699 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 DDX11Q96FC9 970 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 FGD4Q96M96 766 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 IL23AQ9NPF7 189 aa22.89■■□□□ 1.25
SSRP1-204ENST00000529002 MYH7P12883 1935 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 GREB1LQ9C091 1923 aaPredicted RBP22.88■■□□□ 1.25
SSRP1-204ENST00000529002 MYH4Q9Y623 1939 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 A0A0U1RQG5 324 aaPredicted RBP22.88■■□□□ 1.25
SSRP1-204ENST00000529002 USP17L12C9JPN9 530 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 USP17L21D6R901 530 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 CTAGE5O15320 804 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 RLBP1P12271 317 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 PTGS1P23219 599 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 BEX3Q00994 111 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 ACVR2BQ13705 512 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 TTF1Q15361 905 aaPredicted RBP22.88■■□□□ 1.25
SSRP1-204ENST00000529002 RAB30Q15771 203 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 CCDC144BQ3MJ40 725 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 GNASQ5JWF2 1037 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 CCDC174Q6PII3 467 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 OTOP2Q7RTS6 562 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 CCDC17Q96LX7 622 aa22.88■■□□□ 1.25
SSRP1-204ENST00000529002 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.88■■□□□ 1.25
SSRP1-204ENST00000529002 BMP1P13497 986 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 KCNQ1P51787 676 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 C16orf86Q6ZW13 317 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 ITPRIPQ8IWB1 547 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 CPXCR1Q8N123 301 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 MSL3Q8N5Y2 521 aaKnown RBP22.87■■□□□ 1.25
SSRP1-204ENST00000529002 PCSK9Q8NBP7 692 aaKnown RBP22.87■■□□□ 1.25
SSRP1-204ENST00000529002 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.87■■□□□ 1.25
SSRP1-204ENST00000529002 UPF3AQ9H1J1 476 aaKnown RBP22.87■■□□□ 1.25
SSRP1-204ENST00000529002 SLC28A3Q9HAS3 691 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 GOPCQ9HD26 462 aa22.87■■□□□ 1.25
SSRP1-204ENST00000529002 CD4P01730 458 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 GJA9P57773 515 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 CEP85Q6P2H3 762 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 SLF1Q9BQI6 1058 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 TEX13BQ9BXU2 312 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 KANSL2Q9H9L4 492 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 SCN5AQ14524 2016 aa22.86■■□□□ 1.25
SSRP1-204ENST00000529002 FGBP02675 491 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms