RNA–Protein interactions for RNA: ENST00000528267.1

SCN3B-205, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

TSL 4

Gene SCN3B, Length 443 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-205ENST00000528267 RXRAP19793 462 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 CASTP20810 708 aaKnown RBP15.08■□□□□ 0
SCN3B-205ENST00000528267 RPS6KB1P23443 525 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 OTOP1Q7RTM1 612 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 NBPF11Q86T75 865 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 TMEM87BQ96K49 555 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 MTA3Q9BTC8 594 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 MOV10L1Q9BXT6 1211 aaKnown RBP15.08■□□□□ 0
SCN3B-205ENST00000528267 UBA5Q9GZZ9 404 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 SLC38A10Q9HBR0 1119 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 ZSWIM6Q9HCJ5 1215 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 FEM1BQ9UK73 627 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 RIPK3Q9Y572 518 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 BAZ2BQ9UIF8 2168 aaKnown RBP15.08■□□□□ 0
SCN3B-205ENST00000528267 BRCA2P51587 3418 aa15.08■□□□□ 0
SCN3B-205ENST00000528267 LIFRP42702 1097 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 PSMC4P43686 418 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 STAT2P52630 851 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 GRM4Q14833 912 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 SGMS1Q86VZ5 419 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 ZNF654Q8IZM8 581 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 GPRC5AQ8NFJ5 357 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 GTF3C2Q8WUA4 911 aaPredicted RBP15.07■□□□□ 0
SCN3B-205ENST00000528267 ERO1AQ96HE7 468 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 KIF2CQ99661 725 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 AGXT2Q9BYV1 514 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
SCN3B-205ENST00000528267 SPATC1LQ9H0A9 340 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 HOXC10Q9NYD6 342 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 GABRQQ9UN88 632 aa15.07■□□□□ 0
SCN3B-205ENST00000528267 PALM3A6NDB9 673 aaPredicted RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 CYTH3O43739 400 aa15.06■□□□□ 0
SCN3B-205ENST00000528267 TOB2Q14106 344 aaPredicted RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 Q6ZUG5 572 aa15.06■□□□□ 0
SCN3B-205ENST00000528267 PRPF38AQ8NAV1 312 aaKnown RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 TM6SF1Q9BZW5 370 aa15.06■□□□□ 0
SCN3B-205ENST00000528267 RANBP17Q9H2T7 1088 aaKnown RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 RAVER2Q9HCJ3 691 aaKnown RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 ISY1Q9ULR0 285 aaKnown RBP15.06■□□□□ 0
SCN3B-205ENST00000528267 TRIM17Q9Y577 477 aa15.06■□□□□ 0
SCN3B-205ENST00000528267 ERICH2A1L162 156 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 PRKCZQ05513 592 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 SART3Q15020 963 aaKnown RBP15.05■□□□□ -0
SCN3B-205ENST00000528267 SYDE2Q5VT97 1194 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 RUFY3Q7L099 469 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 GPR142Q7Z601 462 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 CTU1Q7Z7A3 348 aaKnown RBP15.05■□□□□ -0
SCN3B-205ENST00000528267 FAM160B2Q86V87 743 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 RBBP6Q7Z6E9 1792 aaKnown RBP15.05■□□□□ -0
SCN3B-205ENST00000528267 PLXNA1Q9UIW2 1896 aa15.05■□□□□ -0
SCN3B-205ENST00000528267 DDAH1O94760 285 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 PLEKHA8P1O95397 391 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 HMGB1P09429 215 aaKnown RBP15.04■□□□□ -0
SCN3B-205ENST00000528267 PARP1P09874 1014 aaKnown RBP15.04■□□□□ -0
SCN3B-205ENST00000528267 ERCC3P19447 782 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 FCGRTP55899 365 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 ANAPC15P60006 121 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 APOBRQ0VD83 1088 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 PLS1Q14651 629 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 ASPRV1Q53RT3 343 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 GPATCH4Q5T3I0 446 aaKnown RBP15.04■□□□□ -0
SCN3B-205ENST00000528267 APOA5Q6Q788 366 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 RIOX2Q8IUF8 465 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 CCDC144CPQ8IYA2 1237 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 CPXCR1Q8N123 301 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 FBXL16Q8N461 479 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 MB21D1Q8N884 522 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 CHURC1Q8WUH1 139 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 BRF1Q92994 677 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 AGBL1Q96MI9 1066 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 LARP6Q9BRS8 491 aaKnown RBP15.04■□□□□ -0
SCN3B-205ENST00000528267 FAM217BQ9NTX9 383 aaPredicted RBP15.04■□□□□ -0
SCN3B-205ENST00000528267 GJD2Q9UKL4 321 aa15.04■□□□□ -0
SCN3B-205ENST00000528267 ATP2A1O14983 1001 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 PPP1R11O60927 126 aaPredicted RBP15.03■□□□□ -0
SCN3B-205ENST00000528267 FMNL1O95466 1100 aaPredicted RBP15.03■□□□□ -0
SCN3B-205ENST00000528267 PSMA5P28066 241 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 IKQ13123 557 aaPredicted RBP15.03■□□□□ -0
SCN3B-205ENST00000528267 MORN1Q5T089 497 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 SNRNP48Q6IEG0 339 aaKnown RBP15.03■□□□□ -0
SCN3B-205ENST00000528267 CCDC174Q6PII3 467 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 NFXL1Q6ZNB6 911 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 CATIPQ7Z7H3 387 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 ADGRF4Q8IZF3 695 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 CMTR1Q8N1G2 835 aaKnown RBP15.03■□□□□ -0
SCN3B-205ENST00000528267 NUP133Q8WUM0 1156 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 USP6NLQ92738 828 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 MTMR8Q96EF0 704 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 BACH2Q9BYV9 841 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 MCOLN1Q9GZU1 580 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 JMJD4Q9H9V9 463 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 SRRDQ9UH36 339 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 HPS5Q9UPZ3 1129 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 PTPN22Q9Y2R2 807 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 PTCH2Q9Y6C5 1203 aa15.03■□□□□ -0
SCN3B-205ENST00000528267 NID2Q14112 1375 aa15.02■□□□□ -0
SCN3B-205ENST00000528267 KLF18A0A0U1RQI7 1052 aa15.02■□□□□ -0
SCN3B-205ENST00000528267 CCDC69A6NI79 296 aa15.02■□□□□ -0
SCN3B-205ENST00000528267 KLRF2D3W0D1 207 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms