RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 CNPY2Q9Y2B0 182 aa26.65■■□□□ 1.86
TRAPPC4-208ENST00000527680 TTLL1O95922 423 aa26.64■■□□□ 1.86
TRAPPC4-208ENST00000527680 MX1P20591 662 aa26.64■■□□□ 1.86
TRAPPC4-208ENST00000527680 GPR153Q6NV75 609 aa26.64■■□□□ 1.86
TRAPPC4-208ENST00000527680 MKL1Q969V6 931 aa26.64■■□□□ 1.86
TRAPPC4-208ENST00000527680 PRDM5Q9NQX1 630 aaPredicted RBP26.64■■□□□ 1.86
TRAPPC4-208ENST00000527680 MYH4Q9Y623 1939 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 IGKV6D-41A0A0C4DH26 115 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 TFAP4Q01664 338 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 ANKRD45Q5TZF3 282 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 LRRC47Q8N1G4 583 aaKnown RBP26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 FEM1BQ9UK73 627 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 RIPK3Q9Y572 518 aa26.63■■□□□ 1.85
TRAPPC4-208ENST00000527680 DNAH12Q6ZR08 3092 aa26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 PLXNA1Q9UIW2 1896 aa26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 ZMYM1Q5SVZ6 1142 aa26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 RNF180Q86T96 592 aa26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 NEDD1Q8NHV4 660 aa26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 RAVER2Q9HCJ3 691 aaKnown RBP26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 GREB1LQ9C091 1923 aaPredicted RBP26.62■■□□□ 1.85
TRAPPC4-208ENST00000527680 LAMA3Q16787 3333 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 PGK1P00558 417 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 PPARAQ07869 468 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 TRIM60Q495X7 471 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 SLFN13Q68D06 897 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 Q7L0L9 218 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 SLC17A8Q8NDX2 589 aa26.61■■□□□ 1.85
TRAPPC4-208ENST00000527680 BMP3P12645 472 aa26.6■■□□□ 1.85
TRAPPC4-208ENST00000527680 AKR1A1P14550 325 aa26.6■■□□□ 1.85
TRAPPC4-208ENST00000527680 RRP1P56182 461 aaKnown RBP26.6■■□□□ 1.85
TRAPPC4-208ENST00000527680 ANKRD35Q8N283 1001 aa26.6■■□□□ 1.85
TRAPPC4-208ENST00000527680 CHMP4CQ96CF2 233 aa26.6■■□□□ 1.85
TRAPPC4-208ENST00000527680 ZNF865P0CJ78 1059 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC4-208ENST00000527680 IKQ13123 557 aaPredicted RBP26.59■■□□□ 1.85
TRAPPC4-208ENST00000527680 GMCL1P1Q8NEA9 526 aa26.59■■□□□ 1.85
TRAPPC4-208ENST00000527680 SYNPO2Q9UMS6 1093 aa26.59■■□□□ 1.85
TRAPPC4-208ENST00000527680 ATP2A1O14983 1001 aa26.58■■□□□ 1.85
TRAPPC4-208ENST00000527680 CCDC129Q6ZRS4 1044 aa26.58■■□□□ 1.85
TRAPPC4-208ENST00000527680 MSL3Q8N5Y2 521 aaKnown RBP26.58■■□□□ 1.85
TRAPPC4-208ENST00000527680 SLC38A10Q9HBR0 1119 aa26.58■■□□□ 1.85
TRAPPC4-208ENST00000527680 TMEM232C9JQI7 657 aa26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 CRBNQ96SW2 442 aa26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 FBXO40Q9UH90 709 aa26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 ZHX1Q9UKY1 873 aaPredicted RBP26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 FAM184BQ9ULE4 1060 aa26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 PHF24Q9UPV7 400 aa26.57■■□□□ 1.84
TRAPPC4-208ENST00000527680 TSPY2A6NKD2 308 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 TLE2Q04725 743 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 CTDSPL2Q05D32 466 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 PPP4R3BQ5MIZ7 849 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 CHURC1Q8WUH1 139 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 EVI5LQ96CN4 794 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 HOMER2Q9NSB8 354 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 STX8Q9UNK0 236 aa26.56■■□□□ 1.84
TRAPPC4-208ENST00000527680 SNAI1O95863 264 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 MCCP23508 829 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 SLC1A4P43007 532 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 SNX17Q15036 470 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 CHST13Q8NET6 341 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 BADQ92934 168 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 LENG1Q96BZ8 264 aaPredicted RBP26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 SYNGAP1Q96PV0 1343 aa26.55■■□□□ 1.84
TRAPPC4-208ENST00000527680 DNAJC25-GNG10A0A024R161 153 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 FDX1P10109 184 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 STAT2P52630 851 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 OAZ1P54368 228 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 C1orf53Q5VUE5 145 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 MAMDC4Q6UXC1 1216 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 INCENPQ9NQS7 918 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 MTMR10Q9NXD2 777 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 TACC3Q9Y6A5 838 aa26.54■■□□□ 1.84
TRAPPC4-208ENST00000527680 RANBP6O60518 1105 aaKnown RBP26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 SH3RF1Q7Z6J0 888 aa26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 FAM160B2Q86V87 743 aa26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 STAG1Q8WVM7 1258 aa26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 PDLIM7Q9NR12 457 aa26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 MTMR7Q9Y216 660 aa26.53■■□□□ 1.84
TRAPPC4-208ENST00000527680 A0A1W2PQ45 241 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 A0A1W2PQY0 241 aa26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 ACVR2BQ13705 512 aa26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 ZNF467Q7Z7K2 595 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 NUP133Q8WUM0 1156 aa26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 PLIN4Q96Q06 1357 aa26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 TSEN34Q9BSV6 310 aaKnown RBP26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 TOMM22Q9NS69 142 aa26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.52■■□□□ 1.84
TRAPPC4-208ENST00000527680 TRIM43BA6NCK2 446 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 PQBP1O60828 265 aaKnown RBP26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 SHHQ15465 462 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 TRIM43Q96BQ3 446 aaPredicted RBP26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 GMCL1Q96IK5 515 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 ABHD16BQ9H3Z7 469 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 STARD7Q9NQZ5 370 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 HELLSQ9NRZ9 838 aa26.51■■□□□ 1.83
TRAPPC4-208ENST00000527680 NMT2O60551 498 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 ADAMTS4O75173 837 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 CLTBP09497 229 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 ACLYP53396 1101 aa26.5■■□□□ 1.83
TRAPPC4-208ENST00000527680 PDE1AP54750 535 aa26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms