RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 CXorf38Q8TB03 319 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 ABHD4Q8TB40 342 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 TMEM74Q96NL1 305 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 KCNQ5Q9NR82 932 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 ST7Q9NRC1 585 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 RTEL1Q9NZ71 1219 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 MAPK8IP1Q9UQF2 711 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 ATP8A1Q9Y2Q0 1164 aa5.04□□□□□ -1.6
CLNS1A-208ENST00000527265 KCNQ2O43526 872 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 CELA3BP08861 270 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 SRFP11831 508 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 RLBP1P12271 317 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 POU3F3P20264 500 aaPredicted RBP5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 CNGA1P29973 690 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 DALRD3Q5D0E6 543 aaKnown RBP5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 TTBK2Q6IQ55 1244 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 FBXL19Q6PCT2 694 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 C11orf96Q7Z7L8 435 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 FAM169BQ8N8A8 192 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 PHC3Q8NDX5 983 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 RHOVQ96L33 236 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 HEXIM2Q96MH2 286 aaKnown RBP5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 DISC1Q9NRI5 854 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 UBP1Q9NZI7 540 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 TLR6Q9Y2C9 796 aa5.03□□□□□ -1.6
CLNS1A-208ENST00000527265 KIF3BO15066 747 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 TSPAN6O43657 245 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 SASH1O94885 1247 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 TRIM37O94972 964 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 GARTP22102 1010 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 FAM160A1Q05DH4 1040 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 FAM50AQ14320 339 aaKnown RBP5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 TCEA2Q15560 299 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 NFE2Q16621 373 aaPredicted RBP5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 LONRF3Q496Y0 759 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 THAP3Q8WTV1 239 aaPredicted RBP5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 KCNC2Q96PR1 638 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 FOXQ1Q9C009 403 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 MAF1Q9H063 256 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 KCNK12Q9HB15 430 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 ACTR10Q9NZ32 417 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 PNMA2Q9UL42 364 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 SAMM50Q9Y512 469 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 SUPT16HQ9Y5B9 1047 aaKnown RBP5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 CD2APQ9Y5K6 639 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 PTCH2Q9Y6C5 1203 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 COMMD10Q9Y6G5 202 aa5.02□□□□□ -1.61
CLNS1A-208ENST00000527265 RFXAPO00287 272 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 PLIN1O60240 522 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 GREM1O60565 184 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 CAND2O75155 1236 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 ALDH1L1O75891 902 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 ASMTLO95671 621 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 PF4P02776 101 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 NME2P22392 152 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 CRKP46108 304 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 RPS26P62854 115 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 APOBRQ0VD83 1088 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 SEPT6Q14141 434 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 NKPD1Q17RQ9 610 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 ZFYVE27Q5T4F4 411 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 RASIP1Q5U651 963 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 AGMOQ6ZNB7 445 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 THNSL2Q86YJ6 484 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 TMEM151BQ8IW70 566 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 SULF2Q8IWU5 870 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 NME8Q8N427 588 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 JMYQ8N9B5 988 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 STK35Q8TDR2 534 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 IL17RAQ96F46 866 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 SLC39A13Q96H72 371 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 MPHOSPH6Q99547 160 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 APBA2Q99767 749 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 PCGF6Q9BYE7 350 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 ZC3H12CQ9C0D7 883 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 CCDC86Q9H6F5 360 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 KRT82Q9NSB4 513 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 GNL3LQ9NVN8 582 aaKnown RBP5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 C19orf73Q9NVV2 129 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 PPT2Q9UMR5 302 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 PLAAQ9Y263 795 aa5.01□□□□□ -1.61
CLNS1A-208ENST00000527265 CCDC189A1A4V9 331 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 FAM155AB1AL88 458 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 MAFGO15525 162 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 DIAPH1O60610 1272 aaKnown RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 TFE3P19532 575 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 BMP6P22004 513 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 EPHB1P54762 984 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 OS9Q13438 667 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 CAMK2GQ13555 558 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 SAFB2Q14151 953 aaKnown RBP eCLIP5□□□□□ -1.61
CLNS1A-208ENST00000527265 PPP2R5AQ15172 486 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 LRRC41Q15345 812 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 TTF1Q15361 905 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 ZXDCQ2QGD7 858 aaPredicted RBP5□□□□□ -1.61
CLNS1A-208ENST00000527265 KIF4BQ2VIQ3 1234 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 MTERF2Q49AM1 385 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 ZNF385BQ569K4 471 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 SNAP47Q5SQN1 464 aa5□□□□□ -1.61
CLNS1A-208ENST00000527265 DDX42Q86XP3 938 aaKnown RBP eCLIP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms