RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 HIPK3Q9H422 1215 aa16.58■□□□□ 0.24
SSRP1-203ENST00000526696 FAM184BQ9ULE4 1060 aa16.58■□□□□ 0.24
SSRP1-203ENST00000526696 AKAP2Q9Y2D5 859 aa16.58■□□□□ 0.24
SSRP1-203ENST00000526696 COL4A4P53420 1690 aaPredicted RBP16.58■□□□□ 0.24
SSRP1-203ENST00000526696 TLR3O15455 904 aaKnown RBP16.57■□□□□ 0.24
SSRP1-203ENST00000526696 C6orf222P0C671 652 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-203ENST00000526696 EVX2Q03828 476 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 GRB10Q13322 594 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 TTLL4Q14679 1199 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 TMEM67Q5HYA8 995 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 ARNTL2Q8WYA1 636 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 NOC4LQ9BVI4 516 aaKnown RBP16.57■□□□□ 0.24
SSRP1-203ENST00000526696 UPF3AQ9H1J1 476 aaKnown RBP16.57■□□□□ 0.24
SSRP1-203ENST00000526696 KCNH6Q9H252 994 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 CNPY2Q9Y2B0 182 aa16.57■□□□□ 0.24
SSRP1-203ENST00000526696 ZFHX2Q9C0A1 2572 aaPredicted RBP16.57■□□□□ 0.24
SSRP1-203ENST00000526696 ZBBXA8MT70 800 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 FLOT1O75955 427 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 TAP1Q03518 808 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 SLC43A3Q8NBI5 491 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 PCSK9Q8NBP7 692 aaKnown RBP16.56■□□□□ 0.24
SSRP1-203ENST00000526696 TET1Q8NFU7 2136 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 CABP5Q9NP86 173 aa16.56■□□□□ 0.24
SSRP1-203ENST00000526696 SLC25A27O95847 323 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 CYP2E1P05181 493 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-203ENST00000526696 PLCD1P51178 756 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 GJA9P57773 515 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 KCTD2Q14681 263 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 RIOX2Q8IUF8 465 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 SIAH1Q8IUQ4 282 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 SCLYQ96I15 445 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 ZHX1Q9UKY1 873 aaPredicted RBP16.55■□□□□ 0.24
SSRP1-203ENST00000526696 ADAMTS5Q9UNA0 930 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 TECTAO75443 2155 aa16.55■□□□□ 0.24
SSRP1-203ENST00000526696 GRIN2DO15399 1336 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 IL9P15248 144 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 GNASQ5JWF2 1037 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 SAMD1Q6SPF0 538 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-203ENST00000526696 SPICE1Q8N0Z3 855 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.54■□□□□ 0.24
SSRP1-203ENST00000526696 SSH1Q8WYL5 1049 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 AGBL1Q96MI9 1066 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 PTPRSQ13332 1948 aa16.54■□□□□ 0.24
SSRP1-203ENST00000526696 RIF1Q5UIP0 2472 aaKnown RBP16.53■□□□□ 0.24
SSRP1-203ENST00000526696 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.53■□□□□ 0.24
SSRP1-203ENST00000526696 POTEB3A0JP26 581 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 ALADP13716 330 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 BEX3Q00994 111 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 GABPAQ06546 454 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 CSPP1Q1MSJ5 1256 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 POTEBQ6S5H4 581 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 MAMDC4Q6UXC1 1216 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 CLEC10AQ8IUN9 316 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 TRPV6Q9H1D0 765 aa16.53■□□□□ 0.24
SSRP1-203ENST00000526696 PIH1D3Q9NQM4 214 aaKnown RBP16.53■□□□□ 0.24
SSRP1-203ENST00000526696 B4GALT4O60513 344 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 UQCRFS1P1P0C7P4 283 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 CCDC144BQ3MJ40 725 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 RPUSD2Q8IZ73 545 aaKnown RBP16.52■□□□□ 0.24
SSRP1-203ENST00000526696 MSL3Q8N5Y2 521 aaKnown RBP16.52■□□□□ 0.24
SSRP1-203ENST00000526696 MIGA1Q8NAN2 632 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 REPS2Q8NFH8 660 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 UBE2ZQ9H832 354 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-203ENST00000526696 FBXO28Q9NVF7 368 aa16.52■□□□□ 0.24
SSRP1-203ENST00000526696 ZNF214Q9UL59 606 aaPredicted RBP16.52■□□□□ 0.24
SSRP1-203ENST00000526696 ASTN1O14525 1302 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 CYP7A1P22680 504 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 SSTR3P32745 418 aaPredicted RBP16.51■□□□□ 0.23
SSRP1-203ENST00000526696 STAT3P40763 770 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 USP5P45974 858 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 NKX3-2P78367 333 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 ACVR2BQ13705 512 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 LEXMQ3ZCV2 418 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 CXCL17Q6UXB2 119 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 HFE2Q6ZVN8 426 aa16.51■□□□□ 0.23
SSRP1-203ENST00000526696 C5orf42Q9H799 3197 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 DNAJC25-GNG10A0A024R161 153 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 DCXO43602 365 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 PTGS1P23219 599 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 TTC6Q86TZ1 520 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 FGD4Q96M96 766 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 MYO7AQ13402 2215 aa16.5■□□□□ 0.23
SSRP1-203ENST00000526696 VWA5AO00534 786 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 MPHOSPH10O00566 681 aaKnown RBP16.49■□□□□ 0.23
SSRP1-203ENST00000526696 ST18O60284 1047 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 GDPD5Q8WTR4 605 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 MEIS3Q99687 375 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 KATNBL1Q9H079 304 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 SPC25Q9HBM1 224 aa16.49■□□□□ 0.23
SSRP1-203ENST00000526696 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.49■□□□□ 0.23
SSRP1-203ENST00000526696 CACNA1BQ00975 2339 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 NAV1Q8NEY1 1877 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.48■□□□□ 0.23
SSRP1-203ENST00000526696 SRGAP3O43295 1099 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 KCNA5P22460 613 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 ZAP70P43403 619 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 ITGA7Q13683 1181 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 DEFB128Q7Z7B8 93 aa16.48■□□□□ 0.23
SSRP1-203ENST00000526696 PRSS33Q8NF86 280 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms