RNA–Protein interactions for RNA: ENST00000526425.1

USP35-201, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best) BASIC

Gene USP35, Length 3,770 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-201ENST00000526425 PNMA1Q8ND90 353 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 EPSTI1Q96J88 318 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 UBA5Q9GZZ9 404 aa11.11□□□□□ -0.63
USP35-201ENST00000526425 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 H0YIN7 160 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 PPEF1O14829 653 aaPredicted RBP11.1□□□□□ -0.63
USP35-201ENST00000526425 PLSCR1O15162 318 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 MMP1P03956 469 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 BTDP43251 543 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 PLA2G4AP47712 749 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 COL23A1Q86Y22 540 aaPredicted RBP11.1□□□□□ -0.63
USP35-201ENST00000526425 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 STAG1Q8WVM7 1258 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 DCP1AQ9NPI6 582 aaPredicted RBP11.1□□□□□ -0.63
USP35-201ENST00000526425 CUTAO60888 179 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 ERCC3P19447 782 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 FANCCQ00597 558 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 FUCA2Q9BTY2 467 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 CSRNP2Q9H175 543 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 URI1O94763 535 aaPredicted RBP11.1□□□□□ -0.63
USP35-201ENST00000526425 NLRP12P59046 1061 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 TTC38Q5R3I4 469 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 SLF2Q8IX21 1173 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
USP35-201ENST00000526425 FANCLQ9NW38 375 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 ADAM21Q9UKJ8 722 aa11.1□□□□□ -0.63
USP35-201ENST00000526425 MROH7-TTC4A0A0A0MT08 1334 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 FRMPD2Q68DX3 1309 aaPredicted RBP11.09□□□□□ -0.63
USP35-201ENST00000526425 ACTN2P35609 894 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 UBA7P41226 1012 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 SNW1Q13573 536 aaKnown RBP11.09□□□□□ -0.63
USP35-201ENST00000526425 LETM2Q2VYF4 491 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 SHC4Q6S5L8 630 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 NSUN4Q96CB9 384 aaKnown RBP11.09□□□□□ -0.63
USP35-201ENST00000526425 ERO1AQ96HE7 468 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 AGXT2Q9BYV1 514 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 GOPCQ9HD26 462 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 IPO7O95373 1038 aaKnown RBP11.09□□□□□ -0.63
USP35-201ENST00000526425 CAVIN2O95810 425 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 USP8P40818 1118 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 SNX1Q13596 522 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 JAKMIP3Q5VZ66 844 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 RRAGBQ5VZM2 374 aa11.09□□□□□ -0.63
USP35-201ENST00000526425 ERLIN2O94905 339 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 MYL5Q02045 173 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 DDR1Q08345 913 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 C2CD5Q86YS7 1000 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 LRRC47Q8N1G4 583 aaKnown RBP11.08□□□□□ -0.63
USP35-201ENST00000526425 CDK5RAP3Q96JB5 506 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 MXD3Q9BW11 206 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 BRIP1Q9BX63 1249 aa11.08□□□□□ -0.63
USP35-201ENST00000526425 CCT6AP40227 531 aaKnown RBP11.08□□□□□ -0.64
USP35-201ENST00000526425 CACNB3P54284 484 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 GPSM2P81274 684 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 PTGDRQ13258 359 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 POSTNQ15063 836 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 TRMT1LQ7Z2T5 733 aaKnown RBP11.08□□□□□ -0.64
USP35-201ENST00000526425 FBXO33Q7Z6M2 555 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 NBPF11Q86T75 865 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 CLEC10AQ8IUN9 316 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 NFE2L3Q9Y4A8 694 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 TACC3Q9Y6A5 838 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 MYH14Q7Z406 1995 aaKnown RBP11.08□□□□□ -0.64
USP35-201ENST00000526425 A0A1W2PQ27 194 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 A0A1W2PQ64 194 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 A0A1W2PQD8 194 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 ENO4A6NNW6 628 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 USP27XA6NNY8 438 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 IVLP07476 585 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 CLNS1AP54105 237 aaKnown RBP11.08□□□□□ -0.64
USP35-201ENST00000526425 ALX1Q15699 326 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 PPFIBP1Q86W92 1011 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 VEZTQ9HBM0 779 aa11.08□□□□□ -0.64
USP35-201ENST00000526425 CBFA2T2O43439 604 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 ECEL1O95672 775 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 RPSAP08865 295 aaKnown RBP11.07□□□□□ -0.64
USP35-201ENST00000526425 CALM1P0DP23 149 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 CALM2P0DP24 149 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 CALM3P0DP25 149 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 NPR1P16066 1061 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 INF2Q27J81 1249 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 MAP9Q49MG5 647 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 USP17L2Q6R6M4 530 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 KIAA0825Q8IV33 1275 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 PROM2Q8N271 834 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 EYA3Q99504 573 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 IDEP14735 1019 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 EZH2Q15910 746 aaKnown RBP11.07□□□□□ -0.64
USP35-201ENST00000526425 TMC4Q7Z404 712 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 SGMS1Q86VZ5 419 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 STAG2Q8N3U4 1231 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 DBNDD1Q9H9R9 158 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 ZNF287Q9HBT7 754 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 DACH1Q9UI36 760 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 TTF2Q9UNY4 1162 aaKnown RBP11.07□□□□□ -0.64
USP35-201ENST00000526425 NUP98P52948 1817 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 FAM196BA6NMK8 535 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 POLRMTO00411 1230 aaKnown RBP11.07□□□□□ -0.64
USP35-201ENST00000526425 KIF4AO95239 1232 aa11.07□□□□□ -0.64
USP35-201ENST00000526425 STAT6P42226 847 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms