RNA–Protein interactions for RNA: ENST00000525367.1

USP47-206, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 434 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-206ENST00000525367 LRRC47Q8N1G4 583 aaKnown RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 ZBTB38Q8NAP3 1195 aaPredicted RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 BTN2A2Q8WVV5 523 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 GPATCH3Q96I76 525 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 GBP3Q9H0R5 595 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 WHRNQ9P202 907 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 CGGBP1Q9UFW8 167 aaPredicted RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 NOP58Q9Y2X3 529 aaKnown RBP6.76□□□□□ -1.33
USP47-206ENST00000525367 CD2APQ9Y5K6 639 aa6.76□□□□□ -1.33
USP47-206ENST00000525367 KCNH1O95259 989 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 PRAMEF1O95521 474 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 ITIH2P19823 946 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 LRP8Q14114 963 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 FIBCD1Q8N539 461 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 BVESQ8NE79 360 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 MRGPRX3Q96LB0 322 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 ZDHHC15Q96MV8 337 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 AKT3Q9Y243 479 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 CAPN6Q9Y6Q1 641 aa6.75□□□□□ -1.33
USP47-206ENST00000525367 H0Y8X5 98 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 VAMP4O75379 141 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 PPM1BO75688 479 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 CAPNS1P04632 268 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 NAT2P11245 290 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 CYP7A1P22680 504 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 CTSKP43235 329 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 TMEM67Q5HYA8 995 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 NOL9Q5SY16 702 aaKnown RBP6.74□□□□□ -1.33
USP47-206ENST00000525367 TRIM59Q8IWR1 403 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 SGSM3Q96HU1 749 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 MCMBPQ9BTE3 642 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 AARSD1Q9BTE6 412 aaKnown RBP6.74□□□□□ -1.33
USP47-206ENST00000525367 EMC9Q9Y3B6 208 aa6.74□□□□□ -1.33
USP47-206ENST00000525367 BLACEA4D250 179 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 IQCA1LA6NCM1 817 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 WDR64B1ANS9 1081 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 AGRPO00253 132 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 PRODHO43272 600 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 ZNF865P0CJ78 1059 aaPredicted RBP6.73□□□□□ -1.33
USP47-206ENST00000525367 NFIAQ12857 509 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 NMIQ13287 307 aaPredicted RBP6.73□□□□□ -1.33
USP47-206ENST00000525367 PRSS53Q2L4Q9 553 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 CCDC181Q5TID7 509 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 RNF43Q68DV7 783 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 CRTC3Q6UUV7 619 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 C16orf86Q6ZW13 317 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 KIAA0907Q7Z7F0 614 aaPredicted RBP6.73□□□□□ -1.33
USP47-206ENST00000525367 MFSD4AQ8N468 514 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 ARHGEF39Q8N4T4 335 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 ZSWIM2Q8NEG5 633 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 GIMAP7Q8NHV1 300 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 SHKBP1Q8TBC3 707 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 KISS1RQ969F8 398 aaPredicted RBP6.73□□□□□ -1.33
USP47-206ENST00000525367 IER2Q9BTL4 223 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 DSCC1Q9BVC3 393 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 GPR55Q9Y2T6 319 aaPredicted RBP6.73□□□□□ -1.33
USP47-206ENST00000525367 FHOD1Q9Y613 1164 aa6.73□□□□□ -1.33
USP47-206ENST00000525367 TRAV20A0A0B4J274 112 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 SIGLEC6O43699 453 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 GYS2P54840 703 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 OXCT1P55809 520 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 CYP4F3Q08477 520 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 HSP90AA2PQ14568 343 aaPredicted RBP6.72□□□□□ -1.33
USP47-206ENST00000525367 DPY19L1Q2PZI1 675 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 CDKAL1Q5VV42 579 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 GTF2IRD2BQ6EKJ0 949 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 GTF2IRD2Q86UP8 949 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 SYTL5Q8TDW5 730 aaPredicted RBP6.72□□□□□ -1.33
USP47-206ENST00000525367 OSBP2Q969R2 916 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 RCC1LQ96I51 464 aaKnown RBP6.72□□□□□ -1.33
USP47-206ENST00000525367 HDAC8Q9BY41 377 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 LRRC4CQ9HCJ2 640 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 CHST7Q9NS84 486 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 GTF2IRD1Q9UHL9 959 aa6.72□□□□□ -1.33
USP47-206ENST00000525367 MRPS23Q9Y3D9 190 aaKnown RBP6.72□□□□□ -1.33
USP47-206ENST00000525367 TRBV23-1A0A0A0MS06 115 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 PABPC1P11940 636 aaKnown RBP6.71□□□□□ -1.34
USP47-206ENST00000525367 KIR3DL1P43629 444 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 C22orf34Q6ZV56 151 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 FEZ1Q99689 392 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 CDC6Q99741 560 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 DBNDD2Q9BQY9 259 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 SLKQ9H2G2 1235 aaPredicted RBP6.71□□□□□ -1.34
USP47-206ENST00000525367 TMX1Q9H3N1 280 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 PLAGL2Q9UPG8 496 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 COL4A3BPQ9Y5P4 624 aa6.71□□□□□ -1.34
USP47-206ENST00000525367 GNAT3A8MTJ3 354 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 STXBP3O00186 592 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 IGF2BP3O00425 579 aaKnown RBP eCLIP6.7□□□□□ -1.34
USP47-206ENST00000525367 NOP56O00567 594 aaKnown RBP6.7□□□□□ -1.34
USP47-206ENST00000525367 HYAL3O43820 417 aaPredicted RBP6.7□□□□□ -1.34
USP47-206ENST00000525367 DLX3O60479 287 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 RAPGEF3O95398 923 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 H2AFB1P0C5Y9 115 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 H2AFB2P0C5Z0 115 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 FSTP19883 344 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 CYP27C1Q4G0S4 372 aa6.7□□□□□ -1.34
USP47-206ENST00000525367 DALRD3Q5D0E6 543 aaKnown RBP6.7□□□□□ -1.34
USP47-206ENST00000525367 FILIP1Q7Z7B0 1213 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms