RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 SZT2Q5T011 3432 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 TSPY2A6NKD2 308 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 POTEB2H3BUK9 544 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 IGHA2P01877 340 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 FDX1P10109 184 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 RARBP10826 455 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 BMP3P12645 472 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 SLC1A4P43007 532 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 OAZ1P54368 228 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 PDE1AP54750 535 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 TFAP4Q01664 338 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 SLFN13Q68D06 897 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 MSL3Q8N5Y2 521 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 TRPV1Q8NER1 839 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 REPS2Q8NFH8 660 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 DDX11Q96FC9 970 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 SEC62Q99442 399 aaKnown RBP10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 LBHD1Q9BQE6 289 aaPredicted RBP10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 STX8Q9UNK0 236 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
CTNNA1-240ENST00000523912 ATP2A1O14983 1001 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 PGK2P07205 417 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 SLC4A3P48751 1232 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 STAT2P52630 851 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 MFAP1P55081 439 aaKnown RBP10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 LRRC26Q2I0M4 334 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 FAM47AQ5JRC9 791 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 RNF180Q86T96 592 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 FAM160B2Q86V87 743 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 CHST13Q8NET6 341 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 CHURC1Q8WUH1 139 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 GMCL1Q96IK5 515 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 TINF2Q9BSI4 451 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 SLC38A10Q9HBR0 1119 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 XPNPEP3Q9NQH7 507 aa10.5□□□□□ -0.73
CTNNA1-240ENST00000523912 LAMA3Q16787 3333 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 TRIM6-TRIM34B2RNG4 842 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 RANBP6O60518 1105 aaKnown RBP10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 AKR1A1P14550 325 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 ATN1P54259 1190 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 ZNF792Q3KQV3 632 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 MCMDC2Q4G0Z9 681 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 GJC2Q5T442 439 aaPredicted RBP10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 CCDC129Q6ZRS4 1044 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 Q7L0L9 218 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 CPXCR1Q8N123 301 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 ANKRD35Q8N283 1001 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 LNPKQ9C0E8 428 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 TOMM22Q9NS69 142 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 SYNGAP1Q96PV0 1343 aa10.49□□□□□ -0.73
CTNNA1-240ENST00000523912 GREB1LQ9C091 1923 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 TMEM232C9JQI7 657 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ORC4O43929 436 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 PCP11498 1178 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 RTP1P59025 263 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ALX1Q15699 326 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 CCDC96Q2M329 555 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 TKFCQ3LXA3 575 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 PRAMEF19Q5SWL8 479 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ANO1Q5XXA6 986 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ZNF467Q7Z7K2 595 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 STAG1Q8WVM7 1258 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 RILPL2Q969X0 211 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ACAD9Q9H845 621 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 RAVER2Q9HCJ3 691 aaKnown RBP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ANAPC4Q9UJX5 808 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ZHX1Q9UKY1 873 aaPredicted RBP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ATP11BQ9Y2G3 1177 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 ZMYM6O95789 1325 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 RLFQ13129 1914 aa10.48□□□□□ -0.73
CTNNA1-240ENST00000523912 HIP1O00291 1037 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 MCCP23508 829 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 NT5C2P49902 561 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 MDM2Q00987 491 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 CTDSPL2Q05D32 466 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 LRRC41Q15345 812 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 C1orf53Q5VUE5 145 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 SMC5Q8IY18 1101 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 DCAF4Q8WV16 495 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 RNF41Q9H4P4 317 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 SPC25Q9HBM1 224 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 PRDM5Q9NQX1 630 aaPredicted RBP10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 HOMER2Q9NSB8 354 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 DIAPH3Q9NSV4 1193 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 FAM184BQ9ULE4 1060 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 CCDC171Q6TFL3 1326 aa10.47□□□□□ -0.73
CTNNA1-240ENST00000523912 A0A0D9SFI3 127 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 PLA2G6O60733 806 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 ADCYAP1R1P41586 468 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 NMIQ13287 307 aaPredicted RBP10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 SNX17Q15036 470 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 RRP12Q5JTH9 1297 aaKnown RBP10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 VPS53Q5VIR6 699 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 B4GALNT3Q6L9W6 998 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 MAMDC4Q6UXC1 1216 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 CHD1LQ86WJ1 897 aa10.46□□□□□ -0.73
CTNNA1-240ENST00000523912 FAM227BQ96M60 508 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms