RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 NCAPHQ15003 741 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 ZNF124Q15973 351 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 NBPF12Q5TAG4 269 aaPredicted RBP5.85□□□□□ -1.47
PCM1-220ENST00000523896 FYB2Q5VWT5 728 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 VHLLQ6RSH7 139 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 C6orf15Q6UXA7 325 aaPredicted RBP5.85□□□□□ -1.47
PCM1-220ENST00000523896 LRP10Q7Z4F1 713 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 TSPYL5Q86VY4 417 aaPredicted RBP5.85□□□□□ -1.47
PCM1-220ENST00000523896 FAM178BQ8IXR5 827 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 MICAL1Q8TDZ2 1067 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 MYLIPQ8WY64 445 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 KLHL6Q8WZ60 621 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 Q96M66 194 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 GPR62Q9BZJ7 368 aa5.85□□□□□ -1.47
PCM1-220ENST00000523896 ZNF503-AS2A6NEH8 195 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 DBX1A6NMT0 343 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 B2RBV5 119 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 GJB6O95452 261 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 ESR1P03372 595 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 JAG1P78504 1218 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 RASA3Q14644 834 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 CCDC144BQ3MJ40 725 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 GNPTABQ3T906 1256 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 OXR1Q8N573 874 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 BHLHE22Q8NFJ8 381 aaPredicted RBP5.84□□□□□ -1.47
PCM1-220ENST00000523896 DUSP15Q9H1R2 295 aaPredicted RBP5.84□□□□□ -1.47
PCM1-220ENST00000523896 ST7Q9NRC1 585 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 PCDHB10Q9UN67 800 aa5.84□□□□□ -1.47
PCM1-220ENST00000523896 DNAJC25-GNG10A0A024R161 153 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 C9IYK1 514 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 DDAH1O94760 285 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 RAP1GAPP47736 663 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 NFE2L2Q16236 605 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 LCE1DQ5T752 114 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 TDRD10Q5VZ19 366 aaKnown RBP5.83□□□□□ -1.48
PCM1-220ENST00000523896 FBXO15Q8NCQ5 510 aaPredicted RBP5.83□□□□□ -1.48
PCM1-220ENST00000523896 ZNF512BQ96KM6 892 aaPredicted RBP5.83□□□□□ -1.48
PCM1-220ENST00000523896 DIRC2Q96SL1 478 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 MKRN2Q9H000 416 aaKnown RBP5.83□□□□□ -1.48
PCM1-220ENST00000523896 CCDC113Q9H0I3 377 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 EPB41L4BQ9H329 900 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 NSUN3Q9H649 340 aaKnown RBP5.83□□□□□ -1.48
PCM1-220ENST00000523896 ZSWIM4Q9H7M6 989 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 C19orf73Q9NVV2 129 aa5.83□□□□□ -1.48
PCM1-220ENST00000523896 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.83□□□□□ -1.48
PCM1-220ENST00000523896 SSU72P8A0A1W2PR75 194 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 ZNF143P52747 638 aaPredicted RBP5.82□□□□□ -1.48
PCM1-220ENST00000523896 DUSP4Q13115 394 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 ANKRD39Q53RE8 183 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 RALGPS1Q5JS13 557 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 MRM1Q6IN84 353 aaKnown RBP5.82□□□□□ -1.48
PCM1-220ENST00000523896 KIAA1211LQ6NV74 962 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 PRR23BQ6ZRT6 265 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 CCDC144CPQ8IYA2 1237 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 PDZD8Q8NEN9 1154 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 DEPDC7Q96QD5 511 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 ADAMTS10Q9H324 1103 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 PIF1Q9H611 641 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 DCP1AQ9NPI6 582 aaPredicted RBP5.82□□□□□ -1.48
PCM1-220ENST00000523896 SNTG2Q9NY99 539 aa5.82□□□□□ -1.48
PCM1-220ENST00000523896 CDK11AQ9UQ88 783 aaPredicted RBP5.82□□□□□ -1.48
PCM1-220ENST00000523896 FITM1A5D6W6 292 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 NFIBO00712 420 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 SHOXO15266 292 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 CBFA2T2O43439 604 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 NAT2P11245 290 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 SRFP11831 508 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 AUHQ13825 339 aaKnown RBP5.81□□□□□ -1.48
PCM1-220ENST00000523896 RASGRF1Q13972 1273 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 BMS1Q14692 1282 aaKnown RBP5.81□□□□□ -1.48
PCM1-220ENST00000523896 GAB4Q2WGN9 574 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 NBPF9Q3BBW0 867 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 AXDND1Q5T1B0 1012 aaPredicted RBP5.81□□□□□ -1.48
PCM1-220ENST00000523896 SYDE1Q6ZW31 735 aaPredicted RBP5.81□□□□□ -1.48
PCM1-220ENST00000523896 EEPD1Q7L9B9 569 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 SPPL2CQ8IUH8 684 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 LILRA2Q8N149 483 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 TOX2Q96NM4 488 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 SRPK1Q96SB4 655 aaKnown RBP5.81□□□□□ -1.48
PCM1-220ENST00000523896 HAUS7Q99871 368 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 KLHL25Q9H0H3 589 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 EPN3Q9H201 632 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 PRR13Q9NZ81 148 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 PCDHA11Q9Y5I1 949 aa5.81□□□□□ -1.48
PCM1-220ENST00000523896 WASH4PA8MWX3 477 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 PDPK1O15530 556 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 SUSD5O60279 629 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 LRRN2O75325 713 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 HPXP02790 462 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 TP53P04637 393 aaPredicted RBP5.8□□□□□ -1.48
PCM1-220ENST00000523896 TMEM253P0C7T8 217 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 CHRNEQ04844 493 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 MESP2Q0VG99 397 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 DCAF15Q66K64 600 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 NOP9Q86U38 636 aaKnown RBP5.8□□□□□ -1.48
PCM1-220ENST00000523896 ANKLE2Q86XL3 938 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 C7orf61Q8IZ16 206 aa5.8□□□□□ -1.48
PCM1-220ENST00000523896 ST13P5Q8NFI4 369 aaPredicted RBP5.8□□□□□ -1.48
PCM1-220ENST00000523896 ENOX1Q8TC92 643 aaKnown RBP5.8□□□□□ -1.48
PCM1-220ENST00000523896 ZNF669Q96BR6 464 aaPredicted RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms