RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 CRY2Q49AN0 593 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 SUSD4Q5VX71 490 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 NIM1KQ8IY84 436 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 ASAP3Q8TDY4 903 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 PSMD1Q99460 953 aa6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 TMX4Q9H1E5 349 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 JPH1Q9HDC5 661 aaPredicted RBP6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 DDX21Q9NR30 783 aaKnown RBP eCLIP6.88□□□□□ -1.31
CTNNA1-239ENST00000523685 UBN2Q6ZU65 1347 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 A0A096LPE4 126 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 A0A1W2PPZ6 126 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 ERVV-1B6SEH8 477 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 LILRB5O75023 590 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 ALBP02768 609 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 USP17L7P0C7H9 530 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 XRCC5P13010 732 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 PTPRAP18433 802 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 EIF2S2P20042 333 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 GRIA4P48058 902 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 FCGRTP55899 365 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 EIF4A1P60842 406 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 MAP2K1Q02750 393 aaPredicted RBP6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 AOC3Q16853 763 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 SPRED3Q2MJR0 410 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 TSNAXIP1Q2TAA8 658 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 CYP4F22Q6NT55 531 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 CACTIN-AS1Q8N1I8 211 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 PNISRQ8TF01 805 aaKnown RBP6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 CAPNS2Q96L46 248 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 BACH2Q9BYV9 841 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 ZFYVE1Q9HBF4 777 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 ENAMQ9NRM1 1142 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 TRIM33Q9UPN9 1127 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 SCN4AP35499 1836 aa6.87□□□□□ -1.31
CTNNA1-239ENST00000523685 MAPK8IP3Q9UPT6 1336 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 CCDC85CA6NKD9 419 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 M0R082 166 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 AOC2O75106 756 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 NTSR2O95665 410 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ANXA1P04083 346 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 CTSHP09668 335 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 HOXA10P31260 410 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ZNF385CQ66K41 422 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 GDF6Q6KF10 455 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 DTHD1Q6ZMT9 781 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 PPP1R42Q7Z4L9 355 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ZNF34Q8IZ26 560 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ZNF417Q8TAU3 575 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 CRELD1Q96HD1 420 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ABHD8Q96I13 439 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 GPR101Q96P66 508 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 CRAMP1Q96RY5 1269 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ZNF587Q96SQ5 575 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 LACRTQ9GZZ8 138 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ADAM19Q9H013 955 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ZNF408Q9H9D4 720 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 TSPYL4Q9UJ04 414 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 ARFGEF2Q9Y6D5 1785 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 COL4A5P29400 1685 aa6.86□□□□□ -1.31
CTNNA1-239ENST00000523685 WIPF1O43516 503 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 CELF2O95319 508 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 ITPKAP23677 461 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 CDC27P30260 824 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 ECE1P42892 770 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 GMPSP49915 693 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 AFF1P51825 1210 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 AIMP1Q12904 312 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 NFE2L2Q16236 605 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 GRIK5Q16478 980 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 CST9Q5W186 159 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 DPP8Q6V1X1 898 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 USP50Q70EL3 339 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 SVOPQ8N4V2 548 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 C3orf58Q8NDZ4 430 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 NEDD1Q8NHV4 660 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 UTP14AQ9BVJ6 771 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 PRDM6Q9NQX0 595 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 AKAP2Q9Y2D5 859 aa6.85□□□□□ -1.31
CTNNA1-239ENST00000523685 SNED1Q8TER0 1413 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 ABCC4O15439 1325 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 RAD17O75943 681 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 RECKO95980 971 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 HCLS1P14317 486 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 CXCL9Q07325 125 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 PROSER3Q2NL68 480 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 PARP10Q53GL7 1025 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 LDLRAD1Q5T700 205 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 ADAMTSL4Q6UY14 1074 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 C8orf86Q6ZUL3 223 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 IL22RA1Q8N6P7 574 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 PLEKHF1Q96S99 279 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 GLIS2Q9BZE0 524 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 MUC3BQ9H195 1237 aa6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 ADARB2Q9NS39 739 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-239ENST00000523685 GPRC5DQ9NZD1 345 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms