RNA–Protein interactions for RNA: ENST00000523190.5

PVT1-217, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 443 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-217ENST00000523190 USP48Q86UV5 1035 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 SULF1Q8IWU6 871 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 DIS3L2Q8IYB7 885 aaKnown RBP7.75□□□□□ -1.17
PVT1-217ENST00000523190 SPICE1Q8N0Z3 855 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 TMEM87AQ8NBN3 555 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 OXER1Q8TDS5 423 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 HOOK2Q96ED9 719 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 RRP36Q96EU6 259 aaKnown RBP7.75□□□□□ -1.17
PVT1-217ENST00000523190 ZNF396Q96N95 335 aaPredicted RBP7.75□□□□□ -1.17
PVT1-217ENST00000523190 USP28Q96RU2 1077 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 WRNIP1Q96S55 665 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 FEZ1Q99689 392 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 PHF20Q9BVI0 1012 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 FTOQ9C0B1 505 aaKnown RBP eCLIP7.75□□□□□ -1.17
PVT1-217ENST00000523190 TAF1DQ9H5J8 278 aaPredicted RBP7.75□□□□□ -1.17
PVT1-217ENST00000523190 RIOX1Q9H6W3 641 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 GOPCQ9HD26 462 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 TMX2Q9Y320 296 aa7.75□□□□□ -1.17
PVT1-217ENST00000523190 SCN4AP35499 1836 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 IQCA1LA6NCM1 817 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 USP17L10C9JJH3 530 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 STXBP3O00186 592 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 TRAK2O60296 914 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 GADD45BO75293 160 aaPredicted RBP7.74□□□□□ -1.17
PVT1-217ENST00000523190 BMP3P12645 472 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 KRT2P35908 639 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 NAPAP54920 295 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 NLRP5P59047 1200 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 CEBPZQ03701 1054 aaKnown RBP7.74□□□□□ -1.17
PVT1-217ENST00000523190 NPY5RQ15761 445 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 SUPT20HL1Q3ZLR7 823 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 TYW1BQ6NUM6 668 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 KRT26Q7Z3Y9 468 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 SCYL3Q8IZE3 742 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 ADGRF4Q8IZF3 695 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 ZKSCAN4Q969J2 545 aaPredicted RBP7.74□□□□□ -1.17
PVT1-217ENST00000523190 GMCL1Q96IK5 515 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 VCPKMTQ9H867 229 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 JMJD4Q9H9V9 463 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 GINM1Q9NU53 330 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 SEC63Q9UGP8 760 aaKnown RBP7.74□□□□□ -1.17
PVT1-217ENST00000523190 ZNF112Q9UJU3 913 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 SYNPO2Q9UMS6 1093 aa7.74□□□□□ -1.17
PVT1-217ENST00000523190 FAM205CA6NFA0 338 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 TMEM232C9JQI7 657 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 ADAMTS3O15072 1205 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 USP2O75604 605 aaPredicted RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 POTEIP0CG38 1075 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 POTEJP0CG39 1038 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 U2AF2P26368 475 aaKnown RBP eCLIP7.73□□□□□ -1.176e-10■■■■■ 29.1
PVT1-217ENST00000523190 SNAP25P60880 206 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 IKQ13123 557 aaPredicted RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 DGKZQ13574 1117 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 CSPP1Q1MSJ5 1256 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 NOM1Q5C9Z4 860 aaKnown RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 FAM83BQ5T0W9 1011 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 SYDE2Q5VT97 1194 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 NOSTRINQ8IVI9 506 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 CCDC148Q8NFR7 591 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 DDX55Q8NHQ9 600 aaKnown RBP eCLIP7.73□□□□□ -1.17
PVT1-217ENST00000523190 LEO1Q8WVC0 666 aaPredicted RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 COA7Q96BR5 231 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 KLRG1Q96E93 195 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 MTMR8Q96EF0 704 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 CDCA5Q96FF9 252 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 SPATA32Q96LK8 384 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 FOXP1Q9H334 677 aaPredicted RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 SH2D4AQ9H788 454 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 BRMS1Q9HCU9 246 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 SH3GLB2Q9NR46 395 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 BARHL2Q9NY43 387 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 CLIC4Q9Y696 253 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 DDX49Q9Y6V7 483 aaKnown RBP7.73□□□□□ -1.17
PVT1-217ENST00000523190 PAPPA2Q9BXP8 1791 aa7.73□□□□□ -1.17
PVT1-217ENST00000523190 TCHHQ07283 1943 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 POLR2AP24928 1970 aaKnown RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 OTOFQ9HC10 1997 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 PNMA6FA0A0J9YX94 578 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 hCG_1984214I3L0E3 225 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 ZBTB5O15062 677 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 PPP1R11O60927 126 aaPredicted RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 PTPRAP18433 802 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 CALML3P27482 149 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 MNX1P50219 401 aaPredicted RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 MTMR2Q13614 643 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 CDC37Q16543 378 aaPredicted RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 QRICH1Q2TAL8 776 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 SKOR2Q2VWA4 1001 aaPredicted RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 EARS2Q5JPH6 523 aaKnown RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 NOL9Q5SY16 702 aaKnown RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 ANO1Q5XXA6 986 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 ATL3Q6DD88 541 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 BTNL9Q6UXG8 535 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 BLIDQ8IZY5 108 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 ZNF713Q8N859 430 aaPredicted RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 GPT2Q8TD30 523 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 RASGRP4Q8TDF6 673 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 ZC3H15Q8WU90 426 aaKnown RBP7.72□□□□□ -1.17
PVT1-217ENST00000523190 TNFRSF25Q93038 417 aa7.72□□□□□ -1.17
PVT1-217ENST00000523190 SCAND2PQ9GZW5 306 aaPredicted RBP7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms