RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 APBB1O00213 710 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 OAZ1P54368 228 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 NKX3-2P78367 333 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 TRIM60Q495X7 471 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 PRAMEF19Q5SWL8 479 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 DIEXFQ68CQ4 756 aaKnown RBP11.25□□□□□ -0.61
SDC2-207ENST00000522911 CCSAPQ6IQ19 270 aaPredicted RBP11.25□□□□□ -0.61
SDC2-207ENST00000522911 KLHDC9Q8NEP7 349 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 OSBP2Q969R2 916 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 TRIM43Q96BQ3 446 aaPredicted RBP11.25□□□□□ -0.61
SDC2-207ENST00000522911 DCTPP1Q9H773 170 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 RCAN3Q9UKA8 241 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 CNPY2Q9Y2B0 182 aa11.25□□□□□ -0.61
SDC2-207ENST00000522911 A0A1W2PQ45 241 aaPredicted RBP11.24□□□□□ -0.61
SDC2-207ENST00000522911 A0A1W2PQY0 241 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 F5H6K3 240 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 DUSP11O75319 330 aaKnown RBP11.24□□□□□ -0.61
SDC2-207ENST00000522911 CHGBP05060 677 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 PGK2P07205 417 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 CLTBP09497 229 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 TLE2Q04725 743 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 SHHQ15465 462 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 LRRFIP1Q32MZ4 808 aaKnown RBP11.24□□□□□ -0.61
SDC2-207ENST00000522911 FAM83BQ5T0W9 1011 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 ZNF697Q5TEC3 545 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 NUP133Q8WUM0 1156 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 BADQ92934 168 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 GPATCH3Q96I76 525 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 SLC38A10Q9HBR0 1119 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 MTMR4Q9NYA4 1195 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 FBXO40Q9UH90 709 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 ELP1O95163 1332 aa11.24□□□□□ -0.61
SDC2-207ENST00000522911 COL11A1P12107 1806 aaPredicted RBP11.23□□□□□ -0.61
SDC2-207ENST00000522911 ZNFX1Q9P2E3 1918 aaKnown RBP11.23□□□□□ -0.61
SDC2-207ENST00000522911 RNF113AO15541 343 aaKnown RBP11.23□□□□□ -0.61
SDC2-207ENST00000522911 PLA2G6O60733 806 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 SNAI1O95863 264 aaPredicted RBP11.23□□□□□ -0.61
SDC2-207ENST00000522911 NDUFB10O96000 172 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 ANO1Q5XXA6 986 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 SEMA6BQ9H3T3 888 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 ABHD16BQ9H3Z7 469 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 MKNK2Q9HBH9 465 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 EPB41L4AQ9HCS5 686 aaPredicted RBP11.23□□□□□ -0.61
SDC2-207ENST00000522911 FEM1BQ9UK73 627 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 FAM184BQ9ULE4 1060 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 MROH7Q68CQ1 1323 aa11.23□□□□□ -0.61
SDC2-207ENST00000522911 GPAA1O43292 621 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 ZBED4O75132 1171 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 TTLL1O95922 423 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 PGK1P00558 417 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 TAL1P17542 331 aaPredicted RBP11.22□□□□□ -0.61
SDC2-207ENST00000522911 CDK7P50613 346 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 ACLYP53396 1101 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 PPP4R3BQ5MIZ7 849 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 SNRNP48Q6IEG0 339 aaKnown RBP11.22□□□□□ -0.61
SDC2-207ENST00000522911 TTC41PQ6P2S7 1318 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 SH3RF1Q7Z6J0 888 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 TICAM2Q86XR7 235 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.22□□□□□ -0.61
SDC2-207ENST00000522911 UPF3AQ9H1J1 476 aaKnown RBP11.22□□□□□ -0.61
SDC2-207ENST00000522911 SYNRGQ9UMZ2 1314 aa11.22□□□□□ -0.61
SDC2-207ENST00000522911 SMCHD1A6NHR9 2005 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 PLXNA1Q9UIW2 1896 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 DCDC2CA8MYV0 355 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 PATL2C9JE40 543 aaKnown RBP11.21□□□□□ -0.61
SDC2-207ENST00000522911 ITGB8P26012 769 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 GJA9P57773 515 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 FAAP100Q0VG06 881 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 PCSK9Q8NBP7 692 aaKnown RBP11.21□□□□□ -0.61
SDC2-207ENST00000522911 NEDD1Q8NHV4 660 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 FERMT2Q96AC1 680 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 DDX11Q96FC9 970 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 CEP95Q96GE4 821 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 GMCL1Q96IK5 515 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 FGD4Q96M96 766 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 CDX2Q99626 313 aaPredicted RBP11.21□□□□□ -0.61
SDC2-207ENST00000522911 SEZ6LQ9BYH1 1024 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 PRDM5Q9NQX1 630 aaPredicted RBP11.21□□□□□ -0.61
SDC2-207ENST00000522911 TBX21Q9UL17 535 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 RIPK3Q9Y572 518 aa11.21□□□□□ -0.61
SDC2-207ENST00000522911 CHD9Q3L8U1 2897 aa11.21□□□□□ -0.62
SDC2-207ENST00000522911 RAG1P15918 1043 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 NOVP48745 357 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 FPGSQ05932 587 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 PDE4BQ07343 736 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 ACVR2BQ13705 512 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 IFNL3Q8IZI9 196 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 ZNF444Q8N0Y2 327 aaPredicted RBP11.2□□□□□ -0.62
SDC2-207ENST00000522911 FAM133AQ8N9E0 248 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 NUP88Q99567 741 aaPredicted RBP11.2□□□□□ -0.62
SDC2-207ENST00000522911 NACAP1Q9BZK3 213 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 KATNBL1Q9H079 304 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 TTYH1Q9H313 450 aaPredicted RBP11.2□□□□□ -0.62
SDC2-207ENST00000522911 STARD7Q9NQZ5 370 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 CLIP2Q9UDT6 1046 aa11.2□□□□□ -0.62
SDC2-207ENST00000522911 MINDY4BA8MYZ0 360 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms