RNA–Protein interactions for RNA: ENST00000522854.5

CSGALNACT1-211, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSGALNACT1, Length 1,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-211ENST00000522854 TMEM87AQ8NBN3 555 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 KLRG1Q96E93 195 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 FEZ1Q99689 392 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 BARHL2Q9NY43 387 aa17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SEC63Q9UGP8 760 aaKnown RBP17.35■□□□□ 0.37
CSGALNACT1-211ENST00000522854 SCN4AP35499 1836 aa17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 BMP3P12645 472 aa17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 KRT2P35908 639 aa17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 TOB1P50616 345 aaPredicted RBP17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 USP50Q70EL3 339 aaPredicted RBP17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 GMCL1Q96IK5 515 aa17.34■□□□□ 0.37
CSGALNACT1-211ENST00000522854 USP2O75604 605 aaPredicted RBP17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 NAPAP54920 295 aa17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 PGBD1Q96JS3 809 aa17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 FOXP1Q9H334 677 aaPredicted RBP17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 VCPKMTQ9H867 229 aa17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 ZNF112Q9UJU3 913 aa17.33■□□□□ 0.37
CSGALNACT1-211ENST00000522854 OTOFQ9HC10 1997 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 MTMR2Q13614 643 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SCYL3Q8IZE3 742 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZNF526Q8TF50 670 aaPredicted RBP17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TNFRSF25Q93038 417 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 GOPCQ9HD26 462 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 FBXO28Q9NVF7 368 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PPP2R3BQ9Y5P8 575 aa17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZC3H4Q9UPT8 1303 aaKnown RBP17.33■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TRIM75PA6NK02 468 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PTPRAP18433 802 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SMARCA1P28370 1054 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SPP2Q13103 211 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 QRICH1Q2TAL8 776 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SUPT20HL1Q3ZLR7 823 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZNF396Q96N95 335 aaPredicted RBP17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SCAND2PQ9GZW5 306 aaPredicted RBP17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CFAP45Q9UL16 551 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PHIPQ8WWQ0 1821 aa17.32■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SF3A1Q15459 793 aaKnown RBP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CDC37Q16543 378 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 MAP1SQ66K74 1059 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CAVIN1Q6NZI2 390 aaKnown RBP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PIK3AP1Q6ZUJ8 805 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CDCA5Q96FF9 252 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 MRVI1Q9Y6F6 885 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 WDR90Q96KV7 1748 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SMCO2A6NFE2 343 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZBTB5O15062 677 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 KLHL40Q2TBA0 621 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ANO1Q5XXA6 986 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 RGS22Q8NE09 1264 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 RRAGCQ9HB90 399 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CLEC11AQ9Y240 323 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHB6Q9Y5E3 794 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZHX2Q9Y6X8 837 aa17.31■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PNMA6FA0A0J9YX94 578 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 IQCA1LA6NCM1 817 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TRAF5O00463 557 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 MARCKSP29966 332 aaPredicted RBP17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 VGLL4Q14135 290 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 BLIDQ8IZY5 108 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 LINC00301Q8NCQ3 95 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 KIFC2Q96AC6 838 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 MTMR8Q96EF0 704 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PICK1Q9NRD5 415 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 RTEL1Q9NZ71 1219 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 RCOR1Q9UKL0 485 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PRR12Q9ULL5 1215 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHA4Q9UN74 947 aa17.3■□□□□ 0.36
CSGALNACT1-211ENST00000522854 STAT2P52630 851 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 UBE2HP62256 183 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 USH1GQ495M9 461 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SYDE2Q5VT97 1194 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SH3GLB2Q9NR46 395 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 EMILIN3Q9NT22 766 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TMEM260Q9NX78 707 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHA6Q9UN73 950 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHA8Q9Y5H6 950 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 M0R2N6 131 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 STK38Q15208 465 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 HOOK2Q96ED9 719 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CLMNQ96JQ2 1002 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ZMYND12Q9H0C1 365 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 BRMS1Q9HCU9 246 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 POLR3EQ9NVU0 708 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 TMEM63CQ9P1W3 806 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ELP1O95163 1332 aa17.29■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PAPPA2Q9BXP8 1791 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 LIG1P18858 919 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 ME1P48163 572 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 NASPP49321 788 aaPredicted RBP17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 CCDC148Q8NFR7 591 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SH2D4AQ9H788 454 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 BIN2Q9UBW5 565 aaPredicted RBP17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PCDHA7Q9UN72 937 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 SNCAIPQ9Y6H5 919 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PTMSP20962 102 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 HMGCS2P54868 508 aa17.28■□□□□ 0.36
CSGALNACT1-211ENST00000522854 PTPAQ15257 358 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms