RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 MAML3Q96JK9 1138 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 RAVER2Q9HCJ3 691 aaKnown RBP12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 RIPK3Q9Y572 518 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 SZT2Q5T011 3432 aa12.17□□□□□ -0.46
CTNNA1-235ENST00000522730 IGKV6D-41A0A0C4DH26 115 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 KBTBD13C9JR72 458 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 SEPT4O43236 478 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 TAL1P17542 331 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 MCCP23508 829 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 MDM2Q00987 491 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 HDAC1Q13547 482 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 RRP12Q5JTH9 1297 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 VPS53Q5VIR6 699 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 NEDD1Q8NHV4 660 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 UBE2OQ9C0C9 1292 aaKnown RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 PRO3102Q9H379 93 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 RWDD1Q9H446 243 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 ZNF214Q9UL59 606 aaPredicted RBP12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 ATP11BQ9Y2G3 1177 aa12.16□□□□□ -0.46
CTNNA1-235ENST00000522730 TSPY2A6NKD2 308 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 DNM1LO00429 736 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 NMT2O60551 498 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 BMP3P12645 472 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 ADCYAP1R1P41586 468 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 SNAP25P60880 206 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 REPS2Q8NFH8 660 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 EXOC6Q8TAG9 804 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 MKL1Q969V6 931 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 FAM227BQ96M60 508 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 GDF15Q99988 308 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 TINF2Q9BSI4 451 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 TEX13BQ9BXU2 312 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 HOMER2Q9NSB8 354 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 FEM1BQ9UK73 627 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 STX8Q9UNK0 236 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 ROBO3Q96MS0 1386 aa12.15□□□□□ -0.46
CTNNA1-235ENST00000522730 RLFQ13129 1914 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 SOX1O00570 391 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 PGK1P00558 417 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 IGHA2P01877 340 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 COPB2P35606 906 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 ZNF792Q3KQV3 632 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 ANKRD35Q8N283 1001 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 LRCH3Q96II8 777 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 LBHD1Q9BQE6 289 aaPredicted RBP12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 HELLSQ9NRZ9 838 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 PRKAG2Q9UGJ0 569 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 CNPY2Q9Y2B0 182 aa12.14□□□□□ -0.47
CTNNA1-235ENST00000522730 SALL3Q9BXA9 1300 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 FOXP2O15409 715 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 IGHDP01880 384 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 RARBP10826 455 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 SLC1A4P43007 532 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 RTP1P59025 263 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 NMIQ13287 307 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 LRRC41Q15345 812 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 CCDC174Q6PII3 467 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 KCTD1Q719H9 257 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 GMCL1P1Q8NEA9 526 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 CHURC1Q8WUH1 139 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 LENG1Q96BZ8 264 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 SLC38A10Q9HBR0 1119 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 XPNPEP3Q9NQH7 507 aa12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 PRDM5Q9NQX1 630 aaPredicted RBP12.13□□□□□ -0.47
CTNNA1-235ENST00000522730 A0A0D9SFI3 127 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 FGAP02671 866 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 BMP8BP34820 402 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 HAND2P61296 217 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 SLC39A5Q6ZMH5 540 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 AGBL1Q96MI9 1066 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 IL17RBQ9NRM6 502 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 ZHX1Q9UKY1 873 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 DIS3Q9Y2L1 958 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 SUPT16HQ9Y5B9 1047 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
CTNNA1-235ENST00000522730 ALPK3Q96L96 1907 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 A0A1W2PPC1 479 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 ALAS1P13196 640 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 STAT2P52630 851 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 CCDC96Q2M329 555 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 TRIM60Q495X7 471 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 RCSD1Q6JBY9 416 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 RASGRP2Q7LDG7 609 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 RNF180Q86T96 592 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 TDHQ8IZJ6 230 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 STAG1Q8WVM7 1258 aa12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 ZNFX1Q9P2E3 1918 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-235ENST00000522730 COL11A1P12107 1806 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 SNAI1O95863 264 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 ZNF865P0CJ78 1059 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 HSPD1P10809 573 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 AKR1A1P14550 325 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 SLC16A2P36021 539 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 ALX1Q15699 326 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 PPP4R3BQ5MIZ7 849 aa12.1□□□□□ -0.47
CTNNA1-235ENST00000522730 NOL8Q76FK4 1167 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms