RNA–Protein interactions for RNA: ENST00000522504.5

TRAPPC9-213, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 665 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-213ENST00000522504 DNAJC25-GNG10A0A024R161 153 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 MYADML2A6NDP7 307 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 F5H6K3 240 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 NDUFB10O96000 172 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 AKR1A1P14550 325 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 KLRC3Q07444 240 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 FAAP100Q0VG06 881 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 C20orf194Q5TEA3 1177 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 SNRNP48Q6IEG0 339 aaKnown RBP18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 DDRGK1Q96HY6 314 aa18.32■□□□□ 0.52
TRAPPC9-213ENST00000522504 GREB1LQ9C091 1923 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 ADCY6O43306 1168 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 RAG1P15918 1043 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 ACLYP53396 1101 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 SBK1Q52WX2 424 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 CCSAPQ6IQ19 270 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 KLHDC9Q8NEP7 349 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 OSBP2Q969R2 916 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 RNPC3Q96LT9 517 aaKnown RBP18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 FGD4Q96M96 766 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 TEX13BQ9BXU2 312 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 EPB41L4AQ9HCS5 686 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 TMEM39AQ9NV64 488 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 NYAP2Q9P242 653 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 ARPP21Q9UBL0 812 aaPredicted RBP18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 CNPY2Q9Y2B0 182 aa18.31■□□□□ 0.52
TRAPPC9-213ENST00000522504 IGKV6D-41A0A0C4DH26 115 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 COPB2P35606 906 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 KCNA10Q16322 511 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 TSHZ3Q63HK5 1081 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 ZSCAN25Q6NSZ9 544 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 MAMDC4Q6UXC1 1216 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 ANKRD33Q7Z3H0 272 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 LRRCC1Q9C099 1032 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 CHD7Q9P2D1 2997 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 PLXNA1Q9UIW2 1896 aa18.3■□□□□ 0.52
TRAPPC9-213ENST00000522504 SYNGAP1Q96PV0 1343 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 MINDY4BA8MYZ0 360 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 PRDM1O75626 825 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 SLC4A3P48751 1232 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 CPXCR1Q8N123 301 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 TSEN34Q9BSV6 310 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 RAVER2Q9HCJ3 691 aaKnown RBP18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 STARD7Q9NQZ5 370 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 ECHDC1Q9NTX5 307 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 CLIP2Q9UDT6 1046 aa18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 ZHX1Q9UKY1 873 aaPredicted RBP18.29■□□□□ 0.52
TRAPPC9-213ENST00000522504 ATP2A1O14983 1001 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 FPGSQ05932 587 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 MSL3Q8N5Y2 521 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 PRPF38AQ8NAV1 312 aaKnown RBP18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 KIFC2Q96AC6 838 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 DDX11Q96FC9 970 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 TOX2Q96NM4 488 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 MKNK2Q9HBH9 465 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 TBX21Q9UL17 535 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 FAM184BQ9ULE4 1060 aa18.28■□□□□ 0.52
TRAPPC9-213ENST00000522504 MYH7P12883 1935 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 M0R2C6 588 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 FOSL2P15408 326 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 GRIN2CQ14957 1233 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 GIMAP6Q6P9H5 292 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 C16orf59Q7L2K0 433 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 KBTBD3Q8NAB2 608 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 CEP95Q96GE4 821 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 SLC38A10Q9HBR0 1119 aa18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.27■□□□□ 0.52
TRAPPC9-213ENST00000522504 MOXD2PA6NHM9 499 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 DCDC2CA8MYV0 355 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 DUSP11O75319 330 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 CDK7P50613 346 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 ACVR2BQ13705 512 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 ZNF467Q7Z7K2 595 aaPredicted RBP18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 LRRC47Q8N1G4 583 aaKnown RBP18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 NUP133Q8WUM0 1156 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 APPBP2Q92624 585 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 MKL1Q969V6 931 aa18.26■□□□□ 0.51
TRAPPC9-213ENST00000522504 CTAGE5O15320 804 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 RNF113AO15541 343 aaKnown RBP18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 GPAA1O43292 621 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 ZBED4O75132 1171 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 TIMP1P01033 207 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 DNAJB2P25686 324 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 CST5P28325 142 aaPredicted RBP18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 CCDC144BQ3MJ40 725 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 USP38Q8NB14 1042 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 KATNBL1Q9H079 304 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 MTMR4Q9NYA4 1195 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 REV3LO60673 3130 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
TRAPPC9-213ENST00000522504 ASGR1P07306 291 aa18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 C6orf222P0C671 652 aaPredicted RBP18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 CNTN2Q02246 1040 aa18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 DIEXFQ68CQ4 756 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 ARMCX2Q7L311 632 aa18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 ANKRD35Q8N283 1001 aa18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 UPF3AQ9H1J1 476 aaKnown RBP18.24■□□□□ 0.51
TRAPPC9-213ENST00000522504 RCAN3Q9UKA8 241 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms