RNA–Protein interactions for RNA: ENST00000522424.5

PTK2-239, Transcript of protein tyrosine kinase 2, humanhuman

TSL 4

Gene PTK2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTK2-239ENST00000522424 PARP1P09874 1014 aaKnown RBP12.18□□□□□ -0.46
PTK2-239ENST00000522424 SNHG28P0DPA3 235 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 HMGCS2P54868 508 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 PPATQ06203 517 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 CCDC96Q2M329 555 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 SLC9C1Q4G0N8 1177 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 KCTD1Q719H9 257 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 ERO1BQ86YB8 467 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 CPVLQ9H3G5 476 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 GPCPD1Q9NPB8 672 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 ISY1Q9ULR0 285 aaKnown RBP12.18□□□□□ -0.46
PTK2-239ENST00000522424 SYNPO2Q9UMS6 1093 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 PTCH2Q9Y6C5 1203 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 LOC285556D6RIA3 1793 aa12.18□□□□□ -0.46
PTK2-239ENST00000522424 ZSWIM8A7E2V4 1837 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 TESPA1A2RU30 521 aaPredicted RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 H0YGN5 161 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 IRF6O14896 467 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 JAK2O60674 1132 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 HSP90AA1P07900 732 aaKnown RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 KIF5BP33176 963 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 SLC1A4P43007 532 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 BACE1P56817 501 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 ZNF543Q08ER8 600 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 PPIL2Q13356 520 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 NTRK3Q16288 839 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 SLC35G1Q2M3R5 365 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 FAM83BQ5T0W9 1011 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 TTBK2Q6IQ55 1244 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 TMTC3Q6ZXV5 915 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 NBPF11Q86T75 865 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 CCDC82Q8N4S0 544 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 SRBD1Q8N5C6 995 aaKnown RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 NSUN7Q8NE18 718 aaKnown RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 DCAF4Q8WV16 495 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 GMCL1Q96IK5 515 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 MAP3K14Q99558 947 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 PTPN18Q99952 460 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 EMILIN3Q9NT22 766 aa12.17□□□□□ -0.46
PTK2-239ENST00000522424 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
PTK2-239ENST00000522424 PTPDC1A2A3K4 754 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 KLRF2D3W0D1 207 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 CPLX1O14810 134 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 BMP3P12645 472 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 SLC16A2P36021 539 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 USP14P54578 494 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 FUT2Q10981 343 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 ASPRV1Q53RT3 343 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 PHKBQ93100 1093 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 DDX11Q96FC9 970 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 UBA5Q9GZZ9 404 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 DAXXQ9UER7 740 aaPredicted RBP12.16□□□□□ -0.46
PTK2-239ENST00000522424 CEP290O15078 2479 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 PARP14Q460N5 1801 aa12.16□□□□□ -0.46
PTK2-239ENST00000522424 MYH6P13533 1939 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 CCDC196A0A1B0GTZ2 297 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 hCG_1642624A0A1W2PR95 340 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 C19orf81C9J6K1 198 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 TMEM232C9JQI7 657 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 DHX16O60231 1041 aaKnown RBP12.15□□□□□ -0.46
PTK2-239ENST00000522424 MYCP01106 439 aaPredicted RBP12.15□□□□□ -0.46
PTK2-239ENST00000522424 IFNAR1P17181 557 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 VCAM1P19320 739 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 ARHGEF6Q15052 776 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 PPP2R5BQ15173 497 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 GPATCH4Q5T3I0 446 aaKnown RBP12.15□□□□□ -0.46
PTK2-239ENST00000522424 CHRDL2Q6WN34 429 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 PIBF1Q8WXW3 757 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 INTS4Q96HW7 963 aaKnown RBP12.15□□□□□ -0.46
PTK2-239ENST00000522424 C12orf42Q96LP6 360 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
PTK2-239ENST00000522424 KCNH4Q9UQ05 1017 aa12.15□□□□□ -0.46
PTK2-239ENST00000522424 CNTNAP5Q8WYK1 1306 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 CXCL11O14625 94 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 WDR46O15213 610 aaKnown RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 CYTH3O43739 400 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 FDPSP14324 419 aaKnown RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 GJB2P29033 226 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 GNAQP50148 359 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 TAF1CQ15572 869 aaPredicted RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 SH3D19Q5HYK7 790 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 GADL1Q6ZQY3 521 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 SMARCC2Q8TAQ2 1214 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 LPAR1Q92633 364 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 SLC26A6Q9BXS9 759 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 RPAP3Q9H6T3 665 aaPredicted RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 ZFYVE28Q9HCC9 887 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 VAT1LQ9HCJ6 419 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 SMC3Q9UQE7 1217 aa12.14□□□□□ -0.47
PTK2-239ENST00000522424 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.14□□□□□ -0.47
PTK2-239ENST00000522424 SZT2Q5T011 3432 aa12.13□□□□□ -0.47
PTK2-239ENST00000522424 CDKL5O76039 1030 aa12.13□□□□□ -0.47
PTK2-239ENST00000522424 FMNL1O95466 1100 aaPredicted RBP12.13□□□□□ -0.47
PTK2-239ENST00000522424 FOSBP53539 338 aa12.13□□□□□ -0.47
PTK2-239ENST00000522424 SSRP1Q08945 709 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms