RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 CTDP1Q9Y5B0 961 aaPredicted RBP24.58■■□□□ 1.53
SDCBP-209ENST00000522243 TSPY2A6NKD2 308 aa24.57■■□□□ 1.52
SDCBP-209ENST00000522243 MCMDC2Q4G0Z9 681 aa24.57■■□□□ 1.52
SDCBP-209ENST00000522243 GMCL1P1Q8NEA9 526 aa24.57■■□□□ 1.52
SDCBP-209ENST00000522243 PCDH10Q9P2E7 1040 aa24.57■■□□□ 1.52
SDCBP-209ENST00000522243 CEP290O15078 2479 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 NMT2O60551 498 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 ZBED4O75132 1171 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 BMP3P12645 472 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 COPB2P35606 906 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 LRRC26Q2I0M4 334 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 ZNF589Q86UQ0 364 aaPredicted RBP24.56■■□□□ 1.52
SDCBP-209ENST00000522243 PLEKHM2Q8IWE5 1019 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 TEX13BQ9BXU2 312 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 SENP6Q9GZR1 1112 aaPredicted RBP24.56■■□□□ 1.52
SDCBP-209ENST00000522243 RAVER2Q9HCJ3 691 aaKnown RBP24.56■■□□□ 1.52
SDCBP-209ENST00000522243 FEM1BQ9UK73 627 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 SYNPO2Q9UMS6 1093 aa24.56■■□□□ 1.52
SDCBP-209ENST00000522243 SUPT16HQ9Y5B9 1047 aaKnown RBP24.56■■□□□ 1.52
SDCBP-209ENST00000522243 RANBP6O60518 1105 aaKnown RBP24.55■■□□□ 1.52
SDCBP-209ENST00000522243 ZNF792Q3KQV3 632 aa24.55■■□□□ 1.52
SDCBP-209ENST00000522243 GJC2Q5T442 439 aaPredicted RBP24.55■■□□□ 1.52
SDCBP-209ENST00000522243 IL17RBQ9NRM6 502 aa24.55■■□□□ 1.52
SDCBP-209ENST00000522243 ANAPC4Q9UJX5 808 aa24.55■■□□□ 1.52
SDCBP-209ENST00000522243 STX8Q9UNK0 236 aa24.55■■□□□ 1.52
SDCBP-209ENST00000522243 TMEM232C9JQI7 657 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 SEPT4O43236 478 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 FGAP02671 866 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 MYCNP04198 464 aaPredicted RBP24.54■■□□□ 1.52
SDCBP-209ENST00000522243 NUCB1Q02818 461 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 ALX1Q15699 326 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 TOMM22Q9NS69 142 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 MTMR7Q9Y216 660 aa24.54■■□□□ 1.52
SDCBP-209ENST00000522243 HSPD1P10809 573 aaKnown RBP24.53■■□□□ 1.52
SDCBP-209ENST00000522243 MCCP23508 829 aa24.53■■□□□ 1.52
SDCBP-209ENST00000522243 RRP12Q5JTH9 1297 aaKnown RBP24.53■■□□□ 1.52
SDCBP-209ENST00000522243 SLC38A10Q9HBR0 1119 aa24.53■■□□□ 1.52
SDCBP-209ENST00000522243 SMCHD1A6NHR9 2005 aa24.52■■□□□ 1.52
SDCBP-209ENST00000522243 DNM1LO00429 736 aa24.52■■□□□ 1.52
SDCBP-209ENST00000522243 ATN1P54259 1190 aaPredicted RBP24.52■■□□□ 1.52
SDCBP-209ENST00000522243 RASGRP2Q7LDG7 609 aa24.52■■□□□ 1.52
SDCBP-209ENST00000522243 DDX11Q96FC9 970 aa24.52■■□□□ 1.52
SDCBP-209ENST00000522243 TINF2Q9BSI4 451 aa24.52■■□□□ 1.52
SDCBP-209ENST00000522243 DIS3Q9Y2L1 958 aaKnown RBP24.52■■□□□ 1.52
SDCBP-209ENST00000522243 ATP2A1O14983 1001 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 TAL1P17542 331 aaPredicted RBP24.51■■□□□ 1.51
SDCBP-209ENST00000522243 SDSP20132 328 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 SLC1A4P43007 532 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 HAND2P61296 217 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 IKQ13123 557 aaPredicted RBP24.51■■□□□ 1.51
SDCBP-209ENST00000522243 KCTD1Q719H9 257 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 ARRDC4Q8NCT1 418 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 OSBPL3Q9H4L5 887 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 CCDC171Q6TFL3 1326 aa24.51■■□□□ 1.51
SDCBP-209ENST00000522243 ORC4O43929 436 aa24.5■■□□□ 1.51
SDCBP-209ENST00000522243 STAT2P52630 851 aa24.5■■□□□ 1.51
SDCBP-209ENST00000522243 GDF15Q99988 308 aa24.5■■□□□ 1.51
SDCBP-209ENST00000522243 FGRP09769 529 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 PPP4R3BQ5MIZ7 849 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 TICAM2Q86XR7 235 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 CHURC1Q8WUH1 139 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 STAG1Q8WVM7 1258 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 GMCL1Q96IK5 515 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 HOMER2Q9NSB8 354 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 TRIOBPQ9H2D6 2365 aa24.49■■□□□ 1.51
SDCBP-209ENST00000522243 KBTBD13C9JR72 458 aa24.48■■□□□ 1.51
SDCBP-209ENST00000522243 MAGEA10P43363 369 aaPredicted RBP24.48■■□□□ 1.51
SDCBP-209ENST00000522243 SNAP25P60880 206 aa24.48■■□□□ 1.51
SDCBP-209ENST00000522243 FAM160B2Q86V87 743 aa24.48■■□□□ 1.51
SDCBP-209ENST00000522243 DNAJC25-GNG10A0A024R161 153 aa24.47■■□□□ 1.51
SDCBP-209ENST00000522243 ZNF865P0CJ78 1059 aaPredicted RBP24.47■■□□□ 1.51
SDCBP-209ENST00000522243 OAZ1P54368 228 aa24.47■■□□□ 1.51
SDCBP-209ENST00000522243 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
SDCBP-209ENST00000522243 RCSD1Q6JBY9 416 aa24.47■■□□□ 1.51
SDCBP-209ENST00000522243 CWC27Q6UX04 472 aaKnown RBP24.47■■□□□ 1.51
SDCBP-209ENST00000522243 ANKRD35Q8N283 1001 aa24.47■■□□□ 1.51
SDCBP-209ENST00000522243 NRBP1Q9UHY1 535 aa24.47■■□□□ 1.51
SDCBP-209ENST00000522243 ZMYM6O95789 1325 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 LRRC41Q15345 812 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 CCDC96Q2M329 555 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 CHST13Q8NET6 341 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 LENG1Q96BZ8 264 aaPredicted RBP24.46■■□□□ 1.51
SDCBP-209ENST00000522243 AGBL1Q96MI9 1066 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 CNPY2Q9Y2B0 182 aa24.46■■□□□ 1.51
SDCBP-209ENST00000522243 ZNF536O15090 1300 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 SNAI1O95863 264 aaPredicted RBP24.45■■□□□ 1.5
SDCBP-209ENST00000522243 FDX1P10109 184 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 RARBP10826 455 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 BMP8BP34820 402 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 NOVP48745 357 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 RTP1P59025 263 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 CCDC174Q6PII3 467 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 FERMT2Q96AC1 680 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 XPNPEP3Q9NQH7 507 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 DIAPH3Q9NSV4 1193 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 FBXO40Q9UH90 709 aa24.45■■□□□ 1.5
SDCBP-209ENST00000522243 MCM3APO60318 1980 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 A0A1W2PPC1 479 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 PGK1P00558 417 aa24.44■■□□□ 1.5
SDCBP-209ENST00000522243 ADCYAP1R1P41586 468 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms