RNA–Protein interactions for RNA: ENST00000521865.5

PABPC1-218, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-218ENST00000521865 IGKV6D-41A0A0C4DH26 115 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 TTLL1O95922 423 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 SLC3A2P08195 630 aaKnown RBP24.83■■□□□ 1.57
PABPC1-218ENST00000521865 PDE4BQ07343 736 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 SNX17Q15036 470 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 BADQ92934 168 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 SEC62Q99442 399 aaKnown RBP24.83■■□□□ 1.57
PABPC1-218ENST00000521865 NAPBQ9H115 298 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 RAVER2Q9HCJ3 691 aaKnown RBP24.83■■□□□ 1.57
PABPC1-218ENST00000521865 PDLIM7Q9NR12 457 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 MTMR4Q9NYA4 1195 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 PHF24Q9UPV7 400 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 STXBP5LQ9Y2K9 1186 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 RIPK3Q9Y572 518 aa24.83■■□□□ 1.57
PABPC1-218ENST00000521865 DNAH12Q6ZR08 3092 aa24.82■■□□□ 1.56
PABPC1-218ENST00000521865 ZNF865P0CJ78 1059 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-218ENST00000521865 LENG1Q96BZ8 264 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-218ENST00000521865 ZBTB47Q9UFB7 747 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-218ENST00000521865 FEM1BQ9UK73 627 aa24.82■■□□□ 1.56
PABPC1-218ENST00000521865 ZHX1Q9UKY1 873 aaPredicted RBP24.82■■□□□ 1.56
PABPC1-218ENST00000521865 DLL1O00548 723 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 TLE2Q04725 743 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 C1orf53Q5VUE5 145 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 ANKRD35Q8N283 1001 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 MSL3Q8N5Y2 521 aaKnown RBP24.81■■□□□ 1.56
PABPC1-218ENST00000521865 MKL1Q969V6 931 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 FAM184BQ9ULE4 1060 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 PCDHB15Q9Y5E8 787 aa24.81■■□□□ 1.56
PABPC1-218ENST00000521865 BMP3P12645 472 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 SLFN13Q68D06 897 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 SH3RF1Q7Z6J0 888 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 PI4K2BQ8TCG2 481 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 OTUD7AQ8TE49 926 aaPredicted RBP24.8■■□□□ 1.56
PABPC1-218ENST00000521865 FAM161BQ96MY7 647 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 SLC38A10Q9HBR0 1119 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 SYNGAP1Q96PV0 1343 aa24.8■■□□□ 1.56
PABPC1-218ENST00000521865 PARP14Q460N5 1801 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 A0A1W2PQ45 241 aaPredicted RBP24.79■■□□□ 1.56
PABPC1-218ENST00000521865 A0A1W2PQY0 241 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 TRIM43BA6NCK2 446 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 ATP2A1O14983 1001 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 TFAP4Q01664 338 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 IKQ13123 557 aaPredicted RBP24.79■■□□□ 1.56
PABPC1-218ENST00000521865 SHHQ15465 462 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 GMCL1P1Q8NEA9 526 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 NEDD1Q8NHV4 660 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 TRIM43Q96BQ3 446 aaPredicted RBP24.79■■□□□ 1.56
PABPC1-218ENST00000521865 SYNPO2Q9UMS6 1093 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 TACC3Q9Y6A5 838 aa24.79■■□□□ 1.56
PABPC1-218ENST00000521865 COL11A1P12107 1806 aaPredicted RBP24.79■■□□□ 1.56
PABPC1-218ENST00000521865 COL6A3P12111 3177 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 PQBP1O60828 265 aaKnown RBP24.78■■□□□ 1.56
PABPC1-218ENST00000521865 CLTBP09497 229 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 MX1P20591 662 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 PPARAQ07869 468 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 CHMP4CQ96CF2 233 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 HOMER2Q9NSB8 354 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 FBXO40Q9UH90 709 aa24.78■■□□□ 1.56
PABPC1-218ENST00000521865 TMEM232C9JQI7 657 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 SNAI1O95863 264 aaPredicted RBP24.77■■□□□ 1.56
PABPC1-218ENST00000521865 ZMYM1Q5SVZ6 1142 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 C9orf50Q5SZB4 431 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 ZNF697Q5TEC3 545 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 MAMDC4Q6UXC1 1216 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 CHST13Q8NET6 341 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 STARD7Q9NQZ5 370 aa24.77■■□□□ 1.56
PABPC1-218ENST00000521865 GREB1LQ9C091 1923 aaPredicted RBP24.76■■□□□ 1.55
PABPC1-218ENST00000521865 DNAJC25-GNG10A0A024R161 153 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 POTEB2H3BUK9 544 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 ADAMTS4O75173 837 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 ACLYP53396 1101 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 FAM109BQ6ICB4 259 aaPredicted RBP24.76■■□□□ 1.55
PABPC1-218ENST00000521865 NUP133Q8WUM0 1156 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 TSEN34Q9BSV6 310 aaKnown RBP24.76■■□□□ 1.55
PABPC1-218ENST00000521865 SYNRGQ9UMZ2 1314 aa24.76■■□□□ 1.55
PABPC1-218ENST00000521865 RAG1P15918 1043 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 STAT2P52630 851 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 OAZ1P54368 228 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 ACVR2BQ13705 512 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 ZNF467Q7Z7K2 595 aaPredicted RBP24.75■■□□□ 1.55
PABPC1-218ENST00000521865 TMEM39AQ9NV64 488 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.75■■□□□ 1.55
PABPC1-218ENST00000521865 STX8Q9UNK0 236 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 PLIN4Q96Q06 1357 aa24.75■■□□□ 1.55
PABPC1-218ENST00000521865 TSPY2A6NKD2 308 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 FDX1P10109 184 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 SLC1A4P43007 532 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 PPP4R3BQ5MIZ7 849 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 CCDC129Q6ZRS4 1044 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 CHURC1Q8WUH1 139 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 SPC25Q9HBM1 224 aa24.74■■□□□ 1.55
PABPC1-218ENST00000521865 MOXD2PA6NHM9 499 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 DUSP11O75319 330 aaKnown RBP24.73■■□□□ 1.55
PABPC1-218ENST00000521865 C6orf222P0C671 652 aaPredicted RBP24.73■■□□□ 1.55
PABPC1-218ENST00000521865 MCCP23508 829 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 KCNA10Q16322 511 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 FAM160B2Q86V87 743 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 GUCD1Q96NT3 240 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 ABHD16BQ9H3Z7 469 aa24.73■■□□□ 1.55
PABPC1-218ENST00000521865 ACAD9Q9H845 621 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms