RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 NCOA5Q9HCD5 579 aaKnown RBP7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 ZSWIM5Q9P217 1185 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 SLC12A7Q9Y666 1083 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 QSER1Q2KHR3 1735 aa7.77□□□□□ -1.17
CTNNA1-228ENST00000521640 DDX60LQ5H9U9 1706 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 GOLGA8AA7E2F4 631 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 IFIT3O14879 490 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 NPHP1O15259 732 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 SPINT1O43278 529 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 DDAH1O94760 285 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 UPP2O95045 317 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 LDHCP07864 332 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 IL1R1P14778 569 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 IARSP41252 1262 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 KCNQ4P56696 695 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 RBM6P78332 1123 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 KIF23Q02241 960 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 MECOMQ03112 1051 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 WTAPQ15007 396 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 SEC23AQ15436 765 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 CHST3Q7LGC8 479 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 ADGRA1Q86SQ6 560 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 IQCA1Q86XH1 822 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 TRIM22Q8IYM9 498 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 TBC1D22AQ8WUA7 517 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 RPGRQ92834 1020 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 MAP3K14Q99558 947 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 NOL10Q9BSC4 688 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 UBAC1Q9BSL1 405 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 RNF26Q9BY78 433 aaPredicted RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 RBM28Q9NW13 759 aaKnown RBP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 ABCF2Q9UG63 623 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 SUGT1Q9Y2Z0 365 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 C10orf71Q711Q0 1435 aa7.76□□□□□ -1.17
CTNNA1-228ENST00000521640 TNS1Q9HBL0 1735 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 NAV1Q8NEY1 1877 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 POLRMTO00411 1230 aaKnown RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 PRKAB2O43741 272 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 PPP6R2O75170 966 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 DEXIO95424 95 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 BAG3O95817 575 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 SERPINB2P05120 415 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 U2AF2P26368 475 aaKnown RBP eCLIP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 SOX11P35716 441 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 CTSOP43234 321 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 FAM160A1Q05DH4 1040 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 TRIM29Q14134 588 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 RTN1Q16799 776 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 TXNRD1Q16881 649 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 FOXD4L6Q3SYB3 417 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 CC2D2BQ6DHV5 1058 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 ADALQ6DHV7 355 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 FOXD4L3Q6VB84 417 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 NFXL1Q6ZNB6 911 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 CCDC73Q6ZRK6 1079 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 RNF135Q8IUD6 432 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 NLGN1Q8N2Q7 840 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 JMYQ8N9B5 988 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 LINC00301Q8NCQ3 95 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 BICD2Q8TD16 824 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF384Q8TF68 577 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 PGBD1Q96JS3 809 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 USP28Q96RU2 1077 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 INSM2Q96T92 566 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 ALG1Q9BT22 464 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 TNMDQ9H2S6 317 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 NAP1L2Q9ULW6 460 aaPredicted RBP7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 ANKRD31Q8N7Z5 1873 aa7.75□□□□□ -1.17
CTNNA1-228ENST00000521640 FOCADQ5VW36 1801 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 FAM237AA0A1B0GTK4 181 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 LDHBP07195 334 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 XBP1P17861 261 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 LIG1P18858 919 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 CDC27P30260 824 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 PTGIRP43119 386 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 PDE4BQ07343 736 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 SSRP1Q08945 709 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 CTR9Q6PD62 1173 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 MICU3Q86XE3 530 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 DZIP1Q86YF9 867 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 CCDC125Q86Z20 511 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 AMOTL1Q8IY63 956 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ELOA2Q8IYF1 753 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF654Q8IZM8 581 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 MIGA1Q8NAN2 632 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 FAM200AQ8TCP9 573 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 MRPS27Q92552 414 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ANKS1AQ92625 1134 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ZSCAN10Q96SZ4 725 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 FOXP1Q9H334 677 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ZNF287Q9HBT7 754 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 DCP1AQ9NPI6 582 aaPredicted RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 DACT1Q9NYF0 836 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 ANKIB1Q9P2G1 1089 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 CCDC39Q9UFE4 941 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 MKRN1Q9UHC7 482 aaKnown RBP7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 DNMT3LQ9UJW3 386 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 GGA1Q9UJY5 639 aa7.74□□□□□ -1.17
CTNNA1-228ENST00000521640 TNKSO95271 1327 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms