RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 TRIM32Q13049 653 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 CCL14Q16627 93 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 DCAF4Q8WV16 495 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 CNNM2Q9H8M5 875 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 SLC38A10Q9HBR0 1119 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 ZSWIM5Q9P217 1185 aa24.31■■□□□ 1.48
TRIM35-203ENST00000521253 ZKSCAN1P17029 563 aaPredicted RBP24.3■■□□□ 1.48
TRIM35-203ENST00000521253 ADORA2AP29274 412 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 ERICH6BQ5W0A0 696 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 FAM160B2Q86V87 743 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 IQCA1Q86XH1 822 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 DGKHQ86XP1 1220 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 CHURC1Q8WUH1 139 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 TEX13BQ9BXU2 312 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 TAF6LQ9Y6J9 622 aa24.3■■□□□ 1.48
TRIM35-203ENST00000521253 TNRC18O15417 2968 aaPredicted RBP24.3■■□□□ 1.48
TRIM35-203ENST00000521253 PLA2G6O60733 806 aa24.29■■□□□ 1.48
TRIM35-203ENST00000521253 HOXC6P09630 235 aa24.29■■□□□ 1.48
TRIM35-203ENST00000521253 IKQ13123 557 aaPredicted RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 CCDC96Q2M329 555 aa24.29■■□□□ 1.48
TRIM35-203ENST00000521253 SNRNP48Q6IEG0 339 aaKnown RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 KIAA1211Q6ZU35 1233 aa24.29■■□□□ 1.48
TRIM35-203ENST00000521253 TRMT44Q8IYL2 757 aaKnown RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 ZSCAN10Q96SZ4 725 aaPredicted RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 LSG1Q9H089 658 aaKnown RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 PPP4R2Q9NY27 417 aa24.29■■□□□ 1.48
TRIM35-203ENST00000521253 CTDP1Q9Y5B0 961 aaPredicted RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 RBM8AQ9Y5S9 174 aaKnown RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 RBBP6Q7Z6E9 1792 aaKnown RBP24.29■■□□□ 1.48
TRIM35-203ENST00000521253 ATP2A1O14983 1001 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 GJB1P08034 283 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 CCDC178Q5BJE1 867 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 ABRAQ8N0Z2 381 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 CPXCR1Q8N123 301 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 NPLOC4Q8TAT6 608 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 RAVER2Q9HCJ3 691 aaKnown RBP24.28■■□□□ 1.48
TRIM35-203ENST00000521253 FLRT1Q9NZU1 646 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 RIPK3Q9Y572 518 aa24.28■■□□□ 1.48
TRIM35-203ENST00000521253 COL11A1P12107 1806 aaPredicted RBP24.28■■□□□ 1.48
TRIM35-203ENST00000521253 PDHBP11177 359 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 FCER1AP12319 257 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 COPB2P35606 906 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 MAP3K21Q5TCX8 1036 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 DPP9Q86TI2 863 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 ENAHQ8N8S7 591 aaPredicted RBP24.27■■□□□ 1.48
TRIM35-203ENST00000521253 ANKS1AQ92625 1134 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 PAK6Q9NQU5 681 aaPredicted RBP24.27■■□□□ 1.48
TRIM35-203ENST00000521253 TNKSO95271 1327 aa24.27■■□□□ 1.48
TRIM35-203ENST00000521253 COBLO75128 1261 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 FDX1P10109 184 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 PRKAR2AP13861 404 aaKnown RBP24.26■■□□□ 1.47
TRIM35-203ENST00000521253 GJA8P48165 433 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 OAZ1P54368 228 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 TRDNQ13061 729 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 TTBK2Q6IQ55 1244 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 SHISA4Q96DD7 197 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 MMP19Q99542 508 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 UBAC1Q9BSL1 405 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 PRR12Q9ULL5 1215 aa24.26■■□□□ 1.47
TRIM35-203ENST00000521253 FRMPD2Q68DX3 1309 aaPredicted RBP24.26■■□□□ 1.47
TRIM35-203ENST00000521253 E7EWF7 191 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 CDC45O75419 566 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 SLC4A3P48751 1232 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 STOX1Q6ZVD7 989 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 CYB5R4Q7L1T6 521 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 U2AF1L4Q8WU68 220 aaKnown RBP24.25■■□□□ 1.47
TRIM35-203ENST00000521253 DEFB118Q96PH6 123 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 XRN2Q9H0D6 950 aaKnown RBP eCLIP24.25■■□□□ 1.47
TRIM35-203ENST00000521253 ANO2Q9NQ90 1003 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 RPTORQ8N122 1335 aa24.25■■□□□ 1.47
TRIM35-203ENST00000521253 ZNF236Q9UL36 1845 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 SNHG28P0DPA3 235 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 SLC16A2P36021 539 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 SNAP25P60880 206 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 CACNB2Q08289 660 aaPredicted RBP24.24■■□□□ 1.47
TRIM35-203ENST00000521253 KCTD2Q14681 263 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 BTNL9Q6UXG8 535 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 PNMA1Q8ND90 353 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 KAT14Q9H8E8 782 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 HMX1Q9NP08 348 aaPredicted RBP24.24■■□□□ 1.47
TRIM35-203ENST00000521253 GPCPD1Q9NPB8 672 aa24.24■■□□□ 1.47
TRIM35-203ENST00000521253 SGPL1O95470 568 aa24.23■■□□□ 1.47
TRIM35-203ENST00000521253 ZNF543Q08ER8 600 aa24.23■■□□□ 1.47
TRIM35-203ENST00000521253 CASC1Q6TDU7 716 aa24.23■■□□□ 1.47
TRIM35-203ENST00000521253 SLC5A4Q9NY91 659 aa24.23■■□□□ 1.47
TRIM35-203ENST00000521253 ZNF536O15090 1300 aa24.23■■□□□ 1.47
TRIM35-203ENST00000521253 IGHA2P01877 340 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 PGK2P07205 417 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 SYDE2Q5VT97 1194 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 MFSD14CQ5VZR4 134 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 RALYLQ86SE5 291 aaKnown RBP24.22■■□□□ 1.47
TRIM35-203ENST00000521253 NCOA7Q8NI08 942 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 AGBL1Q96MI9 1066 aa24.22■■□□□ 1.47
TRIM35-203ENST00000521253 CYP2C19P33261 490 aa24.21■■□□□ 1.47
TRIM35-203ENST00000521253 SEC23AQ15436 765 aa24.21■■□□□ 1.47
TRIM35-203ENST00000521253 OLFML2BQ68BL8 750 aa24.21■■□□□ 1.47
TRIM35-203ENST00000521253 CCDC174Q6PII3 467 aa24.21■■□□□ 1.47
TRIM35-203ENST00000521253 HOMER2Q9NSB8 354 aa24.21■■□□□ 1.47
TRIM35-203ENST00000521253 SLC27A2O14975 620 aa24.2■■□□□ 1.46
TRIM35-203ENST00000521253 GOLGA8HP0CJ92 632 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms