RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 SNRNP48Q6IEG0 339 aaKnown RBP12.74□□□□□ -0.37
PVT1-209ENST00000520913 B4GALNT3Q6L9W6 998 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 CHD1LQ86WJ1 897 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 TRPV1Q8NER1 839 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 FAM227BQ96M60 508 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 FEM1BQ9UK73 627 aa12.74□□□□□ -0.37
PVT1-209ENST00000520913 ATP2A1O14983 1001 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 SEPT4O43236 478 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 ZBED4O75132 1171 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 BMP3P12645 472 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 STAT2P52630 851 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 MFAP1P55081 439 aaKnown RBP12.73□□□□□ -0.37
PVT1-209ENST00000520913 NUCB1Q02818 461 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 NMIQ13287 307 aaPredicted RBP12.73□□□□□ -0.37
PVT1-209ENST00000520913 ALX1Q15699 326 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 SLFN13Q68D06 897 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 KIFC2Q96AC6 838 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 PRO3102Q9H379 93 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 OSBPL3Q9H4L5 887 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 RBM27Q9P2N5 1060 aaKnown RBP12.73□□□□□ -0.37
PVT1-209ENST00000520913 ISY1Q9ULR0 285 aaKnown RBP12.73□□□□□ -0.37
PVT1-209ENST00000520913 STX8Q9UNK0 236 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 DIS3Q9Y2L1 958 aaKnown RBP12.73□□□□□ -0.37
PVT1-209ENST00000520913 LAMA3Q16787 3333 aa12.73□□□□□ -0.37
PVT1-209ENST00000520913 A0A1W2PPC1 479 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 DNM1LO00429 736 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 ORC4O43929 436 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 FDX1P10109 184 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 OAZ1P54368 228 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.72□□□□□ -0.37
PVT1-209ENST00000520913 ZNF589Q86UQ0 364 aaPredicted RBP12.72□□□□□ -0.37
PVT1-209ENST00000520913 FAM160B2Q86V87 743 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 GMCL1Q96IK5 515 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 SLC38A10Q9HBR0 1119 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 NRBP1Q9UHY1 535 aa12.72□□□□□ -0.37
PVT1-209ENST00000520913 LAMA2P24043 3122 aaKnown RBP12.71□□□□□ -0.37
PVT1-209ENST00000520913 KBTBD13C9JR72 458 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 RANBP6O60518 1105 aaKnown RBP12.71□□□□□ -0.37
PVT1-209ENST00000520913 IGHDP01880 384 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 PGK2P07205 417 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 HSPD1P10809 573 aaKnown RBP12.71□□□□□ -0.37
PVT1-209ENST00000520913 SLC1A4P43007 532 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 IKQ13123 557 aaPredicted RBP12.71□□□□□ -0.37
PVT1-209ENST00000520913 ZNF792Q3KQV3 632 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 PLEKHM2Q8IWE5 1019 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 CPXCR1Q8N123 301 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 TINF2Q9BSI4 451 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 TOMM22Q9NS69 142 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 PCDH10Q9P2E7 1040 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 FBXO40Q9UH90 709 aa12.71□□□□□ -0.37
PVT1-209ENST00000520913 TMEM232C9JQI7 657 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 FGAP02671 866 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 FGRP09769 529 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 PCP11498 1178 aaKnown RBP12.7□□□□□ -0.38
PVT1-209ENST00000520913 LRRC26Q2I0M4 334 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 MSL3Q8N5Y2 521 aaKnown RBP12.7□□□□□ -0.38
PVT1-209ENST00000520913 ARRDC4Q8NCT1 418 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 CHST13Q8NET6 341 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 CHURC1Q8WUH1 139 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 DDX11Q96FC9 970 aa12.7□□□□□ -0.38
PVT1-209ENST00000520913 RAVER2Q9HCJ3 691 aaKnown RBP12.7□□□□□ -0.38
PVT1-209ENST00000520913 ZMYND8Q9ULU4 1186 aaPredicted RBP12.7□□□□□ -0.38
PVT1-209ENST00000520913 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 HIP1O00291 1037 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 NMT2O60551 498 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 PLA2G6O60733 806 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 SYN1P17600 705 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 SDSP20132 328 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 SLC4A3P48751 1232 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 RRP12Q5JTH9 1297 aaKnown RBP12.69□□□□□ -0.38
PVT1-209ENST00000520913 ANO1Q5XXA6 986 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 SENP6Q9GZR1 1112 aaPredicted RBP12.69□□□□□ -0.38
PVT1-209ENST00000520913 IL17RBQ9NRM6 502 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 DIAPH3Q9NSV4 1193 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 CNPY2Q9Y2B0 182 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 RIPK3Q9Y572 518 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 SUPT16HQ9Y5B9 1047 aaKnown RBP12.69□□□□□ -0.38
PVT1-209ENST00000520913 TACC3Q9Y6A5 838 aa12.69□□□□□ -0.38
PVT1-209ENST00000520913 DNAJC25-GNG10A0A024R161 153 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 RARBP10826 455 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 AKR1A1P14550 325 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 MCCP23508 829 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 NOVP48745 357 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 HAND2P61296 217 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 CCDC96Q2M329 555 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 PRAMEF19Q5SWL8 479 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 GJC2Q5T442 439 aaPredicted RBP12.68□□□□□ -0.38
PVT1-209ENST00000520913 KCTD1Q719H9 257 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 ZNF467Q7Z7K2 595 aaPredicted RBP12.68□□□□□ -0.38
PVT1-209ENST00000520913 ANKRD35Q8N283 1001 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 DCAF4Q8WV16 495 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 STAG1Q8WVM7 1258 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 GDF15Q99988 308 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 RNF41Q9H4P4 317 aaPredicted RBP12.68□□□□□ -0.38
PVT1-209ENST00000520913 ACAD9Q9H845 621 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 XPNPEP3Q9NQH7 507 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 INCENPQ9NQS7 918 aa12.68□□□□□ -0.38
PVT1-209ENST00000520913 HOMER2Q9NSB8 354 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms