RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CNKSR1Q969H4 720 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 TEKT1Q969V4 418 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 CAPNS2Q96L46 248 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 CCDC17Q96LX7 622 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 GTPBP4Q9BZE4 634 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 EHD4Q9H223 541 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 BARHL2Q9NY43 387 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 TSKSQ9UJT2 592 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 BAZ2AQ9UIF9 1905 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 ECM29Q5VYK3 1845 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 ESYT2A0FGR8 921 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 POLR2DO15514 142 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 HLA-DOAP06340 250 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 MAP2K2P36507 400 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 TXLNAP40222 546 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 GABPAQ06546 454 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 ASPRV1Q53RT3 343 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 KRT25Q7Z3Z0 450 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 IQUBQ8NA54 791 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 SPC24Q8NBT2 197 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 RRP36Q96EU6 259 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 PRIMPOLQ96LW4 560 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 GSDMAQ96QA5 445 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 OSBPL5Q9H0X9 879 aaPredicted RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 CSRNP2Q9H175 543 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 DHX36Q9H2U1 1008 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 TTC12Q9H892 705 aaPredicted RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 SAP30BPQ9UHR5 308 aaKnown RBP11.33□□□□□ -0.6
SPARC-202ENST00000520687 STX8Q9UNK0 236 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 PCDHA5Q9Y5H7 936 aa11.33□□□□□ -0.6
SPARC-202ENST00000520687 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 CCDC194A0A1B0GVG4 234 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 USP17L3A6NCW0 530 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 USP17L4A6NCW7 530 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 KLRF2D3W0D1 207 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 ACTN4O43707 911 aaKnown RBP11.32□□□□□ -0.6
SPARC-202ENST00000520687 MYL1P05976 194 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 PRPHP41219 470 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 MORC3Q14149 939 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 STRIP1Q5VSL9 837 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 USP17L1Q7RTZ2 530 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 CCDC150Q8NCX0 1101 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 ENOX1Q8TC92 643 aaKnown RBP11.32□□□□□ -0.6
SPARC-202ENST00000520687 SHISA4Q96DD7 197 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 C6orf50Q9HD87 102 aa11.32□□□□□ -0.6
SPARC-202ENST00000520687 SEC63Q9UGP8 760 aaKnown RBP11.32□□□□□ -0.6
SPARC-202ENST00000520687 TTF2Q9UNY4 1162 aaKnown RBP11.32□□□□□ -0.6
SPARC-202ENST00000520687 SCN4AP35499 1836 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 M0R2N6 131 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 PTGS1P23219 599 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 KCNJ6P48051 423 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 PTGDRQ13258 359 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 PNOCQ13519 176 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 NCAPHQ15003 741 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 SOGA3Q5TF21 947 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 PPP1R18Q6NYC8 613 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 SH3RF1Q7Z6J0 888 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 C2CD5Q86YS7 1000 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 ZDHHC15Q96MV8 337 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 ZMYND12Q9H0C1 365 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 PDCL3Q9H2J4 239 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 KCND1Q9NSA2 647 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 USP40Q9NVE5 1235 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 MTMR4Q9NYA4 1195 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 SERTAD1Q9UHV2 236 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 SERPINB13Q9UIV8 391 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 NAV1Q8NEY1 1877 aa11.31□□□□□ -0.6
SPARC-202ENST00000520687 CDK5RAP2Q96SN8 1893 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 IGKV6D-41A0A0C4DH26 115 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 STXBP3O00186 592 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 BIN1O00499 593 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 RIMBP2O15034 1052 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 TUBB4AP04350 444 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 ATP2B1P20020 1258 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 HOXA7P31268 230 aaPredicted RBP11.3□□□□□ -0.6
SPARC-202ENST00000520687 EVX2Q03828 476 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 ZNF174Q15697 407 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 PIK3AP1Q6ZUJ8 805 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 AK8Q96MA6 479 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 ZNF830Q96NB3 372 aaPredicted RBP11.3□□□□□ -0.6
SPARC-202ENST00000520687 GLT8D2Q9H1C3 349 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 KCNF1Q9H3M0 494 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 CUEDC2Q9H467 287 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 TAF1DQ9H5J8 278 aaPredicted RBP11.3□□□□□ -0.6
SPARC-202ENST00000520687 RIOX1Q9H6W3 641 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 MAGEF1Q9HAY2 307 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 RMND1Q9NWS8 449 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 MAN1B1Q9UKM7 699 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 SNED1Q8TER0 1413 aa11.3□□□□□ -0.6
SPARC-202ENST00000520687 hCG_1642624A0A1W2PR95 340 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 NFKBIEO00221 500 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 TTLL1O95922 423 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 SNHG28P0DPA3 235 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 FANCCQ00597 558 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 GPATCH4Q5T3I0 446 aaKnown RBP11.29□□□□□ -0.6
SPARC-202ENST00000520687 HEATR3Q7Z4Q2 680 aa11.29□□□□□ -0.6
SPARC-202ENST00000520687 FOXP4Q8IVH2 680 aaPredicted RBP11.29□□□□□ -0.6
SPARC-202ENST00000520687 TEX2Q8IWB9 1127 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms