RNA–Protein interactions for RNA: ENST00000520520.1

CTNNA1-223, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 484 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-223ENST00000520520 PHLPP2Q6ZVD8 1323 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 CCL15-CCL14A0A0B4J2E2 113 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 ZSCAN12O43309 604 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 UQCRFS1P1P0C7P4 283 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 HIBADHP31937 336 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 CBX1P83916 185 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 CAP1Q01518 475 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 MYL5Q02045 173 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 TNFAIP1Q13829 316 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 SAFBQ15424 915 aaKnown RBP eCLIP9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 CCL15Q16663 113 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 SLC4A8Q2Y0W8 1093 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 TMC6Q7Z403 805 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 ELOA2Q8IYF1 753 aaPredicted RBP9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 SLC39A7Q92504 469 aa9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 PUS3Q9BZE2 481 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 NCOA5Q9HCD5 579 aaKnown RBP9.87□□□□□ -0.83
CTNNA1-223ENST00000520520 CUTAO60888 179 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 PFKFB1P16118 471 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 SYKP43405 635 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 CRKP46108 304 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 METAP2P50579 478 aaKnown RBP eCLIP9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 NDUFA8P51970 172 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 GUCY1B3Q02153 619 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 VGLL4Q14135 290 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 GRIK5Q16478 980 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 ATP2B3Q16720 1220 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 SLC9C1Q4G0N8 1177 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 HABP4Q5JVS0 413 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 C15orf52Q6ZUT6 534 aaKnown RBP9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 KRT222Q8N1A0 295 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 XAGE2Q96GT9 111 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 CNNM2Q9H8M5 875 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 CSADQ9Y600 493 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 PTCH2Q9Y6C5 1203 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 NDUFB9Q9Y6M9 179 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 ZSWIM8A7E2V4 1837 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 NID2Q14112 1375 aa9.86□□□□□ -0.83
CTNNA1-223ENST00000520520 FAM237AA0A1B0GTK4 181 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 A0A1B0GVL5 298 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 GPAA1O43292 621 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 DTNBO60941 627 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 ZNF202O95125 648 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 ZSCAN20P17040 1043 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 U2AF2P26368 475 aaKnown RBP eCLIP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 TNNI2P48788 182 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 TIMM10P62072 90 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 FKBP1AP62942 108 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 COL9A3Q14050 684 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 SART3Q15020 963 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 SLC39A14Q15043 492 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 UBE3CQ15386 1083 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 METTL24Q5JXM2 366 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 SH3TC2Q8TF17 1288 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 BRI3BPQ8WY22 251 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 TSC1Q92574 1164 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 OSBP2Q969R2 916 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 FAM84BQ96KN1 310 aaPredicted RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 ALG1Q9BT22 464 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 XPO4Q9C0E2 1151 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 ZFYVE28Q9HCC9 887 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 IFNKQ9P0W0 207 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 METRNQ9UJH8 293 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 DDX41Q9UJV9 622 aaKnown RBP9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 SERPINA10Q9UK55 444 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 CEP131Q9UPN4 1083 aa9.85□□□□□ -0.83
CTNNA1-223ENST00000520520 CCDC66A2RUB6 948 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 SH2B2O14492 632 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 ZBTB43O43298 467 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 SERPINC1P01008 464 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 FDPSP14324 419 aaKnown RBP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 GTF2A2P52657 109 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 RCAN1P53805 252 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 MAP3K9P80192 1104 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 FANCCQ00597 558 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 UBE4AQ14139 1066 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 DPCR1Q3MIW9 517 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 LRRC24Q50LG9 513 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 CT47A1Q5JQC4 288 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 KANK3Q6NY19 840 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 NFXL1Q6ZNB6 911 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 HOMER1Q86YM7 354 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 TRIM22Q8IYM9 498 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 MNS1Q8NEH6 495 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 ZKSCAN4Q969J2 545 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 PPP1R13BQ96KQ4 1090 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 TEPSINQ96N21 525 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 WRNIP1Q96S55 665 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 MTA3Q9BTC8 594 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 KRT23Q9C075 422 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 FTOQ9C0B1 505 aaKnown RBP eCLIP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 ARHGAP39Q9C0H5 1083 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 TUBE1Q9UJT0 475 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 PRDM4Q9UKN5 801 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 CLIC4Q9Y696 253 aa9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 MORC2Q9Y6X9 1032 aaPredicted RBP9.84□□□□□ -0.83
CTNNA1-223ENST00000520520 FAM205AQ6ZU69 1335 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 CCDC196A0A1B0GTZ2 297 aa9.83□□□□□ -0.84
CTNNA1-223ENST00000520520 GOLGA8AA7E2F4 631 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms