RNA–Protein interactions for RNA: ENST00000519643.5

SH3PXD2B-203, Transcript of SH3 and PX domains 2B, humanhuman

TSL 1 (best) BASIC

Gene SH3PXD2B, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2B-203ENST00000519643 PALM3A6NDB9 673 aaPredicted RBP17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 PTMSP20962 102 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 GUCY1A2P33402 732 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 SP3Q02447 781 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 SEPT2Q15019 361 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 FOXD4L6Q3SYB3 417 aaPredicted RBP17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 SUPT20HL1Q3ZLR7 823 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 FOXD4L3Q6VB84 417 aaPredicted RBP17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 LRRC47Q8N1G4 583 aaKnown RBP17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 ZSCAN16Q9H4T2 348 aaPredicted RBP17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 CABP5Q9NP86 173 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 TRIOBPQ9H2D6 2365 aa17.47■□□□□ 0.39
SH3PXD2B-203ENST00000519643 GH2P01242 217 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 PARP1P09874 1014 aaKnown RBP17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 IREB2P48200 963 aaKnown RBP17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 JAG1P78504 1218 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 OTUD7BQ6GQQ9 843 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 STAG2Q8N3U4 1231 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 MKL1Q969V6 931 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 ZNF333Q96JL9 665 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 MS4A4AQ96JQ5 239 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 LZTS2Q9BRK4 669 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 MTMR7Q9Y216 660 aa17.46■□□□□ 0.39
SH3PXD2B-203ENST00000519643 MYH15Q9Y2K3 1946 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 USP17L5A8MUK1 530 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SNHG28P0DPA3 235 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 EEF2P13639 858 aaKnown RBP17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ATP2B2Q01814 1243 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ICA1Q05084 483 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 TRIM29Q14134 588 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 KRT40Q6A162 431 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 MIGA2Q7L4E1 593 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ANKRD13AQ8IZ07 590 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ELP3Q9H9T3 547 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GJB4Q9NTQ9 266 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 V9GY48 417 aaPredicted RBP17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 TCHHQ07283 1943 aa17.45■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PDHBP11177 359 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PKN1Q16512 942 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ASPRV1Q53RT3 343 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 USP17L2Q6R6M4 530 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 RASGRP2Q7LDG7 609 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SIAH1Q8IUQ4 282 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CNKSR2Q8WXI2 1034 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 BRI3BPQ8WY22 251 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 OPTNQ96CV9 577 aa17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 RBM27Q9P2N5 1060 aaKnown RBP17.44■□□□□ 0.38
SH3PXD2B-203ENST00000519643 KLRF2D3W0D1 207 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GOLGA8HP0CJ92 632 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 DNM1Q05193 864 aaKnown RBP17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SLC35G1Q2M3R5 365 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ANP32EQ9BTT0 268 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SPZ1Q9BXG8 430 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ZBTB21Q9ULJ3 1066 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CNPY2Q9Y2B0 182 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PTCH2Q9Y6C5 1203 aa17.43■□□□□ 0.38
SH3PXD2B-203ENST00000519643 hCG_1642624A0A1W2PR95 340 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SMARCA1P28370 1054 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CAP2P40123 477 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 FAM173BQ6P4H8 233 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 LMBRD1Q9NUN5 540 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SYNPO2Q9UMS6 1093 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ATAD5Q96QE3 1844 aa17.42■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PHF20L1A8MW92 1017 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CYTH3O43739 400 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SCG2P13521 617 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 XBP1P17861 261 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 NCLP19338 710 aaKnown RBP17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 KRT85P78386 507 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ZNF543Q08ER8 600 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 TMEM87AQ8NBN3 555 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 DCAF4Q8WV16 495 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 HOOK2Q96ED9 719 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 COLQQ9Y215 455 aaPredicted RBP17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 FRMPD2Q68DX3 1309 aaPredicted RBP17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SZT2Q5T011 3432 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ZSWIM8A7E2V4 1837 aa17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 BAZ2BQ9UIF8 2168 aaKnown RBP17.41■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PRPF40AO75400 957 aaKnown RBP17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 MMP1P03956 469 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GPATCH4Q5T3I0 446 aaKnown RBP17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 DCAF15Q66K64 600 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SLFN13Q68D06 897 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 BRAPQ7Z569 592 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 FAM43AQ8N2R8 423 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GMCL1P1Q8NEA9 526 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 TMEM106CQ9BVX2 250 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 ARHGEF10LQ9HCE6 1279 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 KCNJ14Q9UNX9 436 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 KIF28PB7ZC32 967 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 VGLL4Q14135 290 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SAFBQ15424 915 aaKnown RBP eCLIP17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 CCDC96Q2M329 555 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 PIBF1Q8WXW3 757 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 SHISA4Q96DD7 197 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GDPD2Q9HCC8 539 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GPCPD1Q9NPB8 672 aa17.4■□□□□ 0.38
SH3PXD2B-203ENST00000519643 GINM1Q9NU53 330 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms