RNA–Protein interactions for RNA: ENST00000519540.5

FAM49B-214, Transcript of family with sequence similarity 49 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM49B, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-214ENST00000519540 SHROOM1Q2M3G4 852 aaPredicted RBP21.09■□□□□ 0.97
FAM49B-214ENST00000519540 RRAGDQ9NQL2 400 aaPredicted RBP21.09■□□□□ 0.97
FAM49B-214ENST00000519540 TMOD2Q9NZR1 351 aa21.09■□□□□ 0.97
FAM49B-214ENST00000519540 SMCO2A6NFE2 343 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 POLR2DO15514 142 aaKnown RBP21.08■□□□□ 0.97
FAM49B-214ENST00000519540 EEF2P13639 858 aaKnown RBP21.08■□□□□ 0.97
FAM49B-214ENST00000519540 MCM7P33993 719 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 CEP57L1Q8IYX8 460 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 AGBL3Q8NEM8 1001 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 C6orf50Q9HD87 102 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 ZNF70Q9UC06 446 aaPredicted RBP21.08■□□□□ 0.97
FAM49B-214ENST00000519540 CCDC39Q9UFE4 941 aa21.08■□□□□ 0.97
FAM49B-214ENST00000519540 GOLGB1Q14789 3259 aaKnown RBP21.08■□□□□ 0.96
FAM49B-214ENST00000519540 hCG_1984214I3L0E3 225 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 NLRP12P59046 1061 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 MDM2Q00987 491 aaPredicted RBP21.07■□□□□ 0.96
FAM49B-214ENST00000519540 GPATCH4Q5T3I0 446 aaKnown RBP21.07■□□□□ 0.96
FAM49B-214ENST00000519540 TMEM179Q6ZVK1 233 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 ZNF713Q8N859 430 aaPredicted RBP21.07■□□□□ 0.96
FAM49B-214ENST00000519540 CSRNP1Q96S65 589 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 NAT10Q9H0A0 1025 aaKnown RBP21.07■□□□□ 0.96
FAM49B-214ENST00000519540 TCP10L2B9ZVM9 353 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 GNA11P29992 359 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 CXCL9Q07325 125 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 PNOCQ13519 176 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 SEPT2Q15019 361 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 DPCR1Q3MIW9 517 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 SIAH1Q8IUQ4 282 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 C4orf32Q8N8J7 132 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 JMJD4Q9H9V9 463 aa21.07■□□□□ 0.96
FAM49B-214ENST00000519540 RTN4Q9NQC3 1192 aaKnown RBP21.07■□□□□ 0.96
FAM49B-214ENST00000519540 ESYT2A0FGR8 921 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 CLRN2A0PK11 232 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 BIN1O00499 593 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 ABCB5Q2M3G0 1257 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 TTBK2Q6IQ55 1244 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 ADGRF4Q8IZF3 695 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 EPSTI1Q96J88 318 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 TAOK3Q9H2K8 898 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 SERTAD1Q9UHV2 236 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 BRCA1P38398 1863 aaKnown RBP21.06■□□□□ 0.96
FAM49B-214ENST00000519540 FER1L6Q2WGJ9 1857 aa21.06■□□□□ 0.96
FAM49B-214ENST00000519540 SPDYE2Q495Y8 402 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 ZSCAN30Q86W11 494 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 DHX40Q8IX18 779 aaKnown RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 MTMR14Q8NCE2 650 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 FAM151AQ8WW52 585 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 VWA3AA6NCI4 1184 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 GOLGA6L19H0YKK7 550 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 GDF11O95390 407 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 R3HDM1Q15032 1099 aaKnown RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 INF2Q27J81 1249 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 CCDC96Q2M329 555 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 ARL6IP4Q66PJ3 421 aaKnown RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 PDILTQ8N807 584 aa21.05■□□□□ 0.96
FAM49B-214ENST00000519540 PPP1R1BQ9UD71 204 aaPredicted RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 HERC5Q9UII4 1024 aaKnown RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 HOOK1Q9UJC3 728 aaKnown RBP21.05■□□□□ 0.96
FAM49B-214ENST00000519540 PNMA6FA0A0J9YX94 578 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 FOXN1O15353 648 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 ACTN4O43707 911 aaKnown RBP21.04■□□□□ 0.96
FAM49B-214ENST00000519540 ICA1Q05084 483 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 IL17AQ16552 155 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 KCTD1Q719H9 257 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 KRT25Q7Z3Z0 450 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 SYMPKQ92797 1274 aaKnown RBP21.04■□□□□ 0.96
FAM49B-214ENST00000519540 BPIFA3Q9BQP9 254 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 PTMAP06454 111 aaKnown RBP21.04■□□□□ 0.96
FAM49B-214ENST00000519540 JAG1P78504 1218 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 RBM26Q5T8P6 1007 aaKnown RBP21.04■□□□□ 0.96
FAM49B-214ENST00000519540 COA7Q96BR5 231 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 PCDHA5Q9Y5H7 936 aa21.04■□□□□ 0.96
FAM49B-214ENST00000519540 CNTNAP1P78357 1384 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 A0A087X0B3 334 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 BECN2A8MW95 431 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 SLC16A2P36021 539 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 RRP1BQ14684 758 aaKnown RBP21.03■□□□□ 0.96
FAM49B-214ENST00000519540 FKBP1CQ5VVH2 108 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 KANK3Q6NY19 840 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 DCAF4Q8WV16 495 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 JDP2Q8WYK2 163 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 MTMR8Q96EF0 704 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 SGIP1Q9BQI5 828 aa21.03■□□□□ 0.96
FAM49B-214ENST00000519540 NFKBIEO00221 500 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 POSTNQ15063 836 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 NONOQ15233 471 aaKnown RBP eCLIP21.02■□□□□ 0.96
FAM49B-214ENST00000519540 SLFN13Q68D06 897 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 CIAPIN1Q6FI81 312 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.02■□□□□ 0.96
FAM49B-214ENST00000519540 USP17L10C9JJH3 530 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 GH2P01242 217 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 SLC1A4P43007 532 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 ISM2Q6H9L7 571 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 AOPEPQ8N6M6 819 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 ZBED3Q96IU2 234 aaPredicted RBP21.02■□□□□ 0.96
FAM49B-214ENST00000519540 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
FAM49B-214ENST00000519540 PPP1R11O60927 126 aaPredicted RBP21.01■□□□□ 0.95
FAM49B-214ENST00000519540 REXO1Q8N1G1 1221 aaKnown RBP21.01■□□□□ 0.95
FAM49B-214ENST00000519540 DHX58Q96C10 678 aa21.01■□□□□ 0.95
FAM49B-214ENST00000519540 BIN2Q9UBW5 565 aaPredicted RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms