RNA–Protein interactions for RNA: ENST00000519534.1

CHTF8-206, Transcript of chromosome transmission fidelity factor 8, human

TSL 2

Gene CHTF8, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHTF8-206	ENST00000519534	ZFYVE28	Q9HCC9	887 aa		12.57	□□□□□ -0.4
CHTF8-206	ENST00000519534	FAM217B	Q9NTX9	383 aa	Predicted RBP	12.57	□□□□□ -0.4
CHTF8-206	ENST00000519534	RBM27	Q9P2N5	1060 aa	Known RBP	12.57	□□□□□ -0.4
CHTF8-206	ENST00000519534	RABGAP1	Q9Y3P9	1069 aa		12.57	□□□□□ -0.4
CHTF8-206	ENST00000519534	IGF2BP3	O00425	579 aa	Known RBP eCLIP	12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	AOC2	O75106	756 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	FLOT1	O75955	427 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	IFNAR1	P17181	557 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	CCDC96	Q2M329	555 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	KCTD1	Q719H9	257 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	MICU3	Q86XE3	530 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	FAM177A1	Q8N128	213 aa	Predicted RBP	12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	ZIC5	Q96T25	663 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	P2RX7	Q99572	595 aa	Known RBP	12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	LLPH	Q9BRT6	129 aa	Known RBP	12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	TANGO6	Q9C0B7	1094 aa		12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.56	□□□□□ -0.4
CHTF8-206	ENST00000519534	GOLGA8A	A7E2F4	631 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	GOLGA8B	A8MQT2	603 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	VWA5A	O00534	786 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	RAD21	O60216	631 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	TLR2	O60603	784 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	ZBED4	O75132	1171 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	CDKL5	O76039	1030 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	COPB2	P35606	906 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	HERVK_113	P62684	666 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	HTRA3	P83110	453 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	FUT2	Q10981	343 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	NTRK3	Q16288	839 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	ME3	Q16798	604 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	SYDE2	Q5VT97	1194 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	TMTC3	Q6ZXV5	915 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	STAG2	Q8N3U4	1231 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	JMY	Q8N9B5	988 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	RANBP17	Q9H2T7	1088 aa	Known RBP	12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	SLC38A10	Q9HBR0	1119 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	MORF4L1	Q9UBU8	362 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	PRR12	Q9ULL5	1215 aa		12.55	□□□□□ -0.4
CHTF8-206	ENST00000519534	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	PRPF3	O43395	683 aa	Known RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	ADD1	P35611	737 aa	Known RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	DGKZ	Q13574	1117 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	TTBK2	Q6IQ55	1244 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	C17orf99	Q6UX52	265 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	ADGRF4	Q8IZF3	695 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	SRBD1	Q8N5C6	995 aa	Known RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	RGS22	Q8NE09	1264 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	SMCR8	Q8TEV9	937 aa	Predicted RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	GTF3C6	Q969F1	213 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	NUP88	Q99567	741 aa	Predicted RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	RNF26	Q9BY78	433 aa	Predicted RBP	12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	JMJD4	Q9H9V9	463 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	GPCPD1	Q9NPB8	672 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	OTOF	Q9HC10	1997 aa		12.54	□□□□□ -0.4
CHTF8-206	ENST00000519534	PNMA6F	A0A0J9YX94	578 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	hCG_1984214	I3L0E3	225 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	CPLX1	O14810	134 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	ZBTB5	O15062	677 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	GOLGA8H	P0CJ92	632 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	CDC27	P30260	824 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	CCNA1	P78396	465 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	SCRN1	Q12765	414 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	IK	Q13123	557 aa	Predicted RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	GRM1	Q13255	1194 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	TAF1C	Q15572	869 aa	Predicted RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	FAM110C	Q1W6H9	321 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	TKFC	Q3LXA3	575 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	SAMD3	Q8N6K7	520 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	ZNF713	Q8N859	430 aa	Predicted RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	SHCBP1	Q8NEM2	672 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	REPS2	Q8NFH8	660 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	GPRC5A	Q8NFJ5	357 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	KIFC2	Q96AC6	838 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	RRP36	Q96EU6	259 aa	Known RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	INTS4	Q96HW7	963 aa	Known RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	TMX3	Q96JJ7	454 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	MYL10	Q9BUA6	226 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	BEGAIN	Q9BUH8	593 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	FBXO28	Q9NVF7	368 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	WBP1L	Q9NX94	342 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	RNF186	Q9NXI6	227 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	RBPJL	Q9UBG7	517 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	FRMPD2	Q68DX3	1309 aa	Predicted RBP	12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	PHIP	Q8WWQ0	1821 aa		12.53	□□□□□ -0.4
CHTF8-206	ENST00000519534	CYTH3	O43739	400 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	SLC25A27	O95847	323 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	ICAM1	P05362	532 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	CYP2C8	P10632	490 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	BCR	P11274	1271 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	STAT3	P40763	770 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	CUL4A	Q13619	759 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	NBPF11	Q86T75	865 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	TRIM22	Q8IYM9	498 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	TEX13B	Q9BXU2	312 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	UBA5	Q9GZZ9	404 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	MAP3K20	Q9NYL2	800 aa	Known RBP	12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	NAP1L2	Q9ULW6	460 aa	Predicted RBP	12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	MTMR7	Q9Y216	660 aa		12.52	□□□□□ -0.41
CHTF8-206	ENST00000519534	CTDP1	Q9Y5B0	961 aa	Predicted RBP	12.52	□□□□□ -0.41

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