RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 XPNPEP3Q9NQH7 507 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 MTMR4Q9NYA4 1195 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 FEM1BQ9UK73 627 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 ISY1Q9ULR0 285 aaKnown RBP12.94□□□□□ -0.34
PVT1-208ENST00000519481 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 FRMPD3Q5JV73 1810 aa12.94□□□□□ -0.34
PVT1-208ENST00000519481 FDX1P10109 184 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 AKR1A1P14550 325 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 MX1P20591 662 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 ADCYAP1R1P41586 468 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 CPXCR1Q8N123 301 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 DEFB123Q8N688 67 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 PI4K2BQ8TCG2 481 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 MKL1Q969V6 931 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 CEP95Q96GE4 821 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 PRDM5Q9NQX1 630 aaPredicted RBP12.93□□□□□ -0.34
PVT1-208ENST00000519481 FBXO40Q9UH90 709 aa12.93□□□□□ -0.34
PVT1-208ENST00000519481 ZNFX1Q9P2E3 1918 aaKnown RBP12.92□□□□□ -0.34
PVT1-208ENST00000519481 IGKV6D-41A0A0C4DH26 115 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 ATP2A1O14983 1001 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 BMP3P12645 472 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 PPARAQ07869 468 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 IKQ13123 557 aaPredicted RBP12.92□□□□□ -0.34
PVT1-208ENST00000519481 ZMYM1Q5SVZ6 1142 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 SLFN13Q68D06 897 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 GMCL1P1Q8NEA9 526 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 NEDD1Q8NHV4 660 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
PVT1-208ENST00000519481 SEC62Q99442 399 aaKnown RBP12.92□□□□□ -0.34
PVT1-208ENST00000519481 COL11A1P12107 1806 aaPredicted RBP12.91□□□□□ -0.34
PVT1-208ENST00000519481 PARP14Q460N5 1801 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 SZT2Q5T011 3432 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 OAZ1P54368 228 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
PVT1-208ENST00000519481 TFAP4Q01664 338 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 TRIM60Q495X7 471 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 ANKRD45Q5TZF3 282 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 LRRC47Q8N1G4 583 aaKnown RBP12.91□□□□□ -0.34
PVT1-208ENST00000519481 ANKRD35Q8N283 1001 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 SLC17A8Q8NDX2 589 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 CHST13Q8NET6 341 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 CHURC1Q8WUH1 139 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 SLC38A10Q9HBR0 1119 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 RAVER2Q9HCJ3 691 aaKnown RBP12.91□□□□□ -0.34
PVT1-208ENST00000519481 FAM184BQ9ULE4 1060 aa12.91□□□□□ -0.34
PVT1-208ENST00000519481 SYNGAP1Q96PV0 1343 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 GREB1LQ9C091 1923 aaPredicted RBP12.9□□□□□ -0.34
PVT1-208ENST00000519481 TSPY2A6NKD2 308 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 PGK1P00558 417 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 ZNF865P0CJ78 1059 aaPredicted RBP12.9□□□□□ -0.34
PVT1-208ENST00000519481 STAT2P52630 851 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 SNX17Q15036 470 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 C1orf53Q5VUE5 145 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 ZNF467Q7Z7K2 595 aaPredicted RBP12.9□□□□□ -0.34
PVT1-208ENST00000519481 FAM160B2Q86V87 743 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 OTUD7AQ8TE49 926 aaPredicted RBP12.9□□□□□ -0.34
PVT1-208ENST00000519481 EVI5LQ96CN4 794 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 SPC25Q9HBM1 224 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 ZHX1Q9UKY1 873 aaPredicted RBP12.9□□□□□ -0.34
PVT1-208ENST00000519481 PHF24Q9UPV7 400 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 RIPK3Q9Y572 518 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 PLIN4Q96Q06 1357 aa12.9□□□□□ -0.34
PVT1-208ENST00000519481 DNAJC25-GNG10A0A024R161 153 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 TMEM232C9JQI7 657 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 TAL1P17542 331 aaPredicted RBP12.89□□□□□ -0.35
PVT1-208ENST00000519481 SLC1A4P43007 532 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 MAMDC4Q6UXC1 1216 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.89□□□□□ -0.35
PVT1-208ENST00000519481 NUP133Q8WUM0 1156 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 TSEN34Q9BSV6 310 aaKnown RBP12.89□□□□□ -0.35
PVT1-208ENST00000519481 STX8Q9UNK0 236 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 TACC3Q9Y6A5 838 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 SMCHD1A6NHR9 2005 aa12.89□□□□□ -0.35
PVT1-208ENST00000519481 MYH4Q9Y623 1939 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 TLE2Q04725 743 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 ACVR2BQ13705 512 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 Q7L0L9 218 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 STAG1Q8WVM7 1258 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 BADQ92934 168 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 GMCL1Q96IK5 515 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 CRBNQ96SW2 442 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 ABHD16BQ9H3Z7 469 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 ACAD9Q9H845 621 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 PDLIM7Q9NR12 457 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 HOMER2Q9NSB8 354 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 MTMR10Q9NXD2 777 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.88□□□□□ -0.35
PVT1-208ENST00000519481 PLXNA1Q9UIW2 1896 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 DNAH12Q6ZR08 3092 aa12.88□□□□□ -0.35
PVT1-208ENST00000519481 A0A1W2PQ45 241 aaPredicted RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 A0A1W2PQY0 241 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 MOXD2PA6NHM9 499 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 POTEB2H3BUK9 544 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 RANBP6O60518 1105 aaKnown RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 DUSP11O75319 330 aaKnown RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 SNAI1O95863 264 aaPredicted RBP12.87□□□□□ -0.35
PVT1-208ENST00000519481 CLTBP09497 229 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 MCCP23508 829 aa12.87□□□□□ -0.35
PVT1-208ENST00000519481 CTDSPL2Q05D32 466 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms