RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
CDKL3-203ENST00000519312 GADL1Q6ZQY3 521 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 PAWRQ96IZ0 340 aaKnown RBP9.5□□□□□ -0.89
CDKL3-203ENST00000519312 OSBPL5Q9H0X9 879 aaPredicted RBP9.5□□□□□ -0.89
CDKL3-203ENST00000519312 DDX4Q9NQI0 724 aaKnown RBP9.5□□□□□ -0.89
CDKL3-203ENST00000519312 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 MORF4L1Q9UBU8 362 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 STAP2Q9UGK3 403 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 STXBP5LQ9Y2K9 1186 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 LRRFIP2Q9Y608 721 aaKnown RBP9.5□□□□□ -0.89
CDKL3-203ENST00000519312 MROH7-TTC4A0A0A0MT08 1334 aa9.5□□□□□ -0.89
CDKL3-203ENST00000519312 UNC80Q8N2C7 3258 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 MYH2Q9UKX2 1941 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 GPR75-ASB3A0A0A6YYF3 556 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 PHKA1P46020 1223 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 RHBDL3P58872 404 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 PABPC4Q13310 644 aaKnown RBP eCLIP9.49□□□□□ -0.89
CDKL3-203ENST00000519312 CCDC102BQ68D86 513 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 ANKRD13CQ8N6S4 541 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 COPRSQ9NQ92 184 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 GJD2Q9UKL4 321 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 OGDHLQ9ULD0 1010 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 RPTORQ8N122 1335 aa9.49□□□□□ -0.89
CDKL3-203ENST00000519312 AK9Q5TCS8 1911 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 DDX60LQ5H9U9 1706 aaKnown RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 PLXNB2O15031 1838 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 SLC35F4A4IF30 521 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 TRIM75PA6NK02 468 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 XRCC5P13010 732 aaKnown RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 RASGRF1Q13972 1273 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 ALDH1L2Q3SY69 923 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 TREML2Q5T2D2 321 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 SPTY2D1Q68D10 685 aaPredicted RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 DZIP1Q86YF9 867 aaKnown RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 GPR161Q8N6U8 529 aaKnown RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 ZNF280CQ8ND82 737 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 DIS3LQ8TF46 1054 aaKnown RBP9.48□□□□□ -0.89
CDKL3-203ENST00000519312 SSH1Q8WYL5 1049 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 HDAC5Q9UQL6 1122 aa9.48□□□□□ -0.89
CDKL3-203ENST00000519312 E9PSI1 815 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 COL6A1P12109 1028 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 BTDP43251 543 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 SCTRP47872 440 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 RNF20Q5VTR2 975 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 ZSCAN29Q8IWY8 852 aaPredicted RBP9.47□□□□□ -0.89
CDKL3-203ENST00000519312 TDHQ8IZJ6 230 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 ZNF384Q8TF68 577 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 SOCS4Q8WXH5 440 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 C11orf49Q9H6J7 331 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 HERC5Q9UII4 1024 aaKnown RBP9.47□□□□□ -0.89
CDKL3-203ENST00000519312 PCDHB11Q9Y5F2 797 aa9.47□□□□□ -0.89
CDKL3-203ENST00000519312 IGSF3O75054 1194 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 UBTFL1P0CB47 393 aaPredicted RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 HOXA7P31268 230 aaPredicted RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 CAP2P40123 477 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 MCCD1P59942 119 aaPredicted RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 ERVK-9P63128 1117 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 METTL16Q86W50 562 aaKnown RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 C7orf61Q8IZ16 206 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 DEFB123Q8N688 67 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 TRIB2Q92519 343 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 WDR18Q9BV38 432 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 ASCC2Q9H1I8 757 aaPredicted RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 GINM1Q9NU53 330 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 MTMR10Q9NXD2 777 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.46□□□□□ -0.9
CDKL3-203ENST00000519312 ATAD5Q96QE3 1844 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 PFASO15067 1338 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 CUL9Q8IWT3 2517 aa9.46□□□□□ -0.9
CDKL3-203ENST00000519312 DOCK3Q8IZD9 2030 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 USP17L5A8MUK1 530 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 ANP32CO43423 234 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 SLURP2P0DP57 97 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 ADORA1P30542 326 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 MAGEA10P43363 369 aaPredicted RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 GSTO1P78417 241 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 KRT76Q01546 638 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 MECOMQ03112 1051 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 SPP2Q13103 211 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 PICALMQ13492 652 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 MTX1Q13505 466 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 MVPQ14764 893 aaKnown RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 FAM109BQ6ICB4 259 aaPredicted RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 CCDC84Q86UT8 332 aaPredicted RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 GTF3C2Q8WUA4 911 aaPredicted RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 USP6NLQ92738 828 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 NSUN4Q96CB9 384 aaKnown RBP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 SIL1Q9H173 461 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.45□□□□□ -0.9
CDKL3-203ENST00000519312 AS3MTQ9HBK9 375 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 ABCF2Q9UG63 623 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 AKAP2Q9Y2D5 859 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 MAST2Q6P0Q8 1798 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 SIPA1L1O43166 1804 aa9.45□□□□□ -0.9
CDKL3-203ENST00000519312 A0A1B0GUL7 405 aa9.44□□□□□ -0.9
CDKL3-203ENST00000519312 MEN1O00255 615 aa9.44□□□□□ -0.9
CDKL3-203ENST00000519312 LDHCP07864 332 aa9.44□□□□□ -0.9
CDKL3-203ENST00000519312 CT47B1P0C2W7 299 aaPredicted RBP9.44□□□□□ -0.9
CDKL3-203ENST00000519312 HMGCS2P54868 508 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms