RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 PPP1R9AQ9ULJ8 1098 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 ADAMTS5Q9UNA0 930 aa11.01□□□□□ -0.65
CLN8-203ENST00000518780 PDHXO00330 501 aa11□□□□□ -0.65
CLN8-203ENST00000518780 ZBED4O75132 1171 aa11□□□□□ -0.65
CLN8-203ENST00000518780 ADD1P35611 737 aaKnown RBP11□□□□□ -0.65
CLN8-203ENST00000518780 VEGFBP49765 207 aa11□□□□□ -0.65
CLN8-203ENST00000518780 SCRN1Q12765 414 aa11□□□□□ -0.65
CLN8-203ENST00000518780 MKRN3Q13064 507 aaKnown RBP11□□□□□ -0.65
CLN8-203ENST00000518780 IKQ13123 557 aaPredicted RBP11□□□□□ -0.65
CLN8-203ENST00000518780 TREML2Q5T2D2 321 aa11□□□□□ -0.65
CLN8-203ENST00000518780 SYDE2Q5VT97 1194 aa11□□□□□ -0.65
CLN8-203ENST00000518780 IFNL1Q8IU54 200 aa11□□□□□ -0.65
CLN8-203ENST00000518780 TEX2Q8IWB9 1127 aa11□□□□□ -0.65
CLN8-203ENST00000518780 TRIM22Q8IYM9 498 aa11□□□□□ -0.65
CLN8-203ENST00000518780 FAM177A1Q8N128 213 aaPredicted RBP11□□□□□ -0.65
CLN8-203ENST00000518780 INTS4Q96HW7 963 aaKnown RBP11□□□□□ -0.65
CLN8-203ENST00000518780 PTPN18Q99952 460 aa11□□□□□ -0.65
CLN8-203ENST00000518780 MYL10Q9BUA6 226 aa11□□□□□ -0.65
CLN8-203ENST00000518780 RNF26Q9BY78 433 aaPredicted RBP11□□□□□ -0.65
CLN8-203ENST00000518780 MAF1Q9H063 256 aa11□□□□□ -0.65
CLN8-203ENST00000518780 ASCC2Q9H1I8 757 aaPredicted RBP11□□□□□ -0.65
CLN8-203ENST00000518780 GPCPD1Q9NPB8 672 aa11□□□□□ -0.65
CLN8-203ENST00000518780 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
CLN8-203ENST00000518780 MTMR7Q9Y216 660 aa11□□□□□ -0.65
CLN8-203ENST00000518780 ZSCAN21Q9Y5A6 473 aaPredicted RBP11□□□□□ -0.65
CLN8-203ENST00000518780 MYH8P13535 1937 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 hCG_1984214I3L0E3 225 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 ATP2A1O14983 1001 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 GOLGA8HP0CJ92 632 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 PDIA4P13667 645 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 CDC27P30260 824 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 COPB2P35606 906 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 ANP32AP39687 249 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 CCT2P78371 535 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 HMGN5P82970 282 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 AKAP17AQ02040 695 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 CUL4AQ13619 759 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 NTRK3Q16288 839 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 ADGRF4Q8IZF3 695 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 STAG2Q8N3U4 1231 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 SRBD1Q8N5C6 995 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 ZNF713Q8N859 430 aaPredicted RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 RGS22Q8NE09 1264 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 WASF1Q92558 559 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 KIFC2Q96AC6 838 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 MTMR8Q96EF0 704 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 RRP36Q96EU6 259 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 NUP88Q99567 741 aaPredicted RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 CFHR5Q9BXR6 569 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 SEC63Q9UGP8 760 aaKnown RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 PRR12Q9ULL5 1215 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 RABGAP1Q9Y3P9 1069 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 KIF3AQ9Y496 699 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 CTDP1Q9Y5B0 961 aaPredicted RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 FRMPD2Q68DX3 1309 aaPredicted RBP10.99□□□□□ -0.65
CLN8-203ENST00000518780 OTOFQ9HC10 1997 aa10.99□□□□□ -0.65
CLN8-203ENST00000518780 PNMA6FA0A0J9YX94 578 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 IGF2BP3O00425 579 aaKnown RBP eCLIP10.98□□□□□ -0.65
CLN8-203ENST00000518780 VWA5AO00534 786 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 ZBTB5O15062 677 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 PRPF3O43395 683 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 CA12O43570 354 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 CD2BP2O95400 341 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 RXRAP19793 462 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 HERVK_113P62684 666 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 MAP2K1Q02750 393 aaPredicted RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 SSRP1Q08945 709 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 FUT2Q10981 343 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 STK3Q13188 491 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 GRM1Q13255 1194 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 TTBK2Q6IQ55 1244 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 NOL8Q76FK4 1167 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 CCDC144CPQ8IYA2 1237 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 FAM43AQ8N2R8 423 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 P2RX7Q99572 595 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 LARP6Q9BRS8 491 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 UBA5Q9GZZ9 404 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 RANBP17Q9H2T7 1088 aaKnown RBP10.98□□□□□ -0.65
CLN8-203ENST00000518780 JMJD4Q9H9V9 463 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 SLC38A10Q9HBR0 1119 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 STK36Q9NRP7 1315 aa10.98□□□□□ -0.65
CLN8-203ENST00000518780 SPDYE16A6NNV3 312 aaPredicted RBP10.97□□□□□ -0.65
CLN8-203ENST00000518780 CYTH3O43739 400 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 TLR2O60603 784 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 PLEKHA8P1O95397 391 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 DEXIO95424 95 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 FMNL1O95466 1100 aaPredicted RBP10.97□□□□□ -0.65
CLN8-203ENST00000518780 ICAM1P05362 532 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 SLC16A2P36021 539 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 DGKZQ13574 1117 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 TAF1CQ15572 869 aaPredicted RBP10.97□□□□□ -0.65
CLN8-203ENST00000518780 TKFCQ3LXA3 575 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 NBPF11Q86T75 865 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 SMCR8Q8TEV9 937 aaPredicted RBP10.97□□□□□ -0.65
CLN8-203ENST00000518780 AMNQ9BXJ7 453 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 NCOA5Q9HCD5 579 aaKnown RBP10.97□□□□□ -0.65
CLN8-203ENST00000518780 TSHZ2Q9NRE2 1034 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 FBXO28Q9NVF7 368 aa10.97□□□□□ -0.65
CLN8-203ENST00000518780 SAGE1Q9NXZ1 904 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms