RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 BRIP1Q9BX63 1249 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 DZANK1Q9NVP4 752 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 TRIM33Q9UPN9 1127 aa8.32□□□□□ -1.08
CCDC6-203ENST00000518638 SCN11AQ9UI33 1791 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 A0A087WZG4 1122 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 CD68P34810 354 aaPredicted RBP8.31□□□□□ -1.08
CCDC6-203ENST00000518638 EPHX2P34913 555 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 MAP2K2P36507 400 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 PLCB3Q01970 1234 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 FMR1Q06787 632 aaKnown RBP eCLIP8.31□□□□□ -1.08
CCDC6-203ENST00000518638 PEAR1Q5VY43 1037 aaPredicted RBP8.31□□□□□ -1.08
CCDC6-203ENST00000518638 CEP135Q66GS9 1140 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 CLEC10AQ8IUN9 316 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 SIN3AQ96ST3 1273 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 ANGEL1Q9UNK9 670 aaKnown RBP8.31□□□□□ -1.08
CCDC6-203ENST00000518638 ANKRD31Q8N7Z5 1873 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 CARMIL3Q8ND23 1372 aa8.31□□□□□ -1.08
CCDC6-203ENST00000518638 COL11A2P13942 1736 aaPredicted RBP8.31□□□□□ -1.08
CCDC6-203ENST00000518638 SCN7AQ01118 1682 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 CACNA1SQ13698 1873 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 NPHP1O15259 732 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
CCDC6-203ENST00000518638 EIF4A2Q14240 407 aaKnown RBP8.3□□□□□ -1.08
CCDC6-203ENST00000518638 STYK1Q6J9G0 422 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 FAM20CQ8IXL6 584 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 CNTROBQ8N137 903 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 OSMRQ99650 979 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 FAM83CQ9BQN1 747 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 ZKSCAN3Q9BRR0 538 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 LATS2Q9NRM7 1088 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 TRPM7Q96QT4 1865 aa8.3□□□□□ -1.08
CCDC6-203ENST00000518638 CYP19A1P11511 503 aaPredicted RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 ST5P78524 1137 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 ENOX2Q16206 610 aaKnown RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 CCDC27Q2M243 656 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 CCDC93Q567U6 631 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 TMCO4Q5TGY1 634 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 DNAJC14Q6Y2X3 702 aaPredicted RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 TMEM102Q8N9M5 508 aaPredicted RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 CAPNS2Q96L46 248 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 GPR101Q96P66 508 aaPredicted RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 POP1Q99575 1024 aaKnown RBP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 MCOLN1Q9GZU1 580 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 DDX21Q9NR30 783 aaKnown RBP eCLIP8.29□□□□□ -1.08
CCDC6-203ENST00000518638 MRC1P22897 1456 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 LTBP1Q14766 1721 aa8.29□□□□□ -1.08
CCDC6-203ENST00000518638 PDE4DIPQ5VU43 2346 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 LINC01387J3KSC0 135 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
CCDC6-203ENST00000518638 PRPF40BQ6NWY9 871 aaKnown RBP8.28□□□□□ -1.08
CCDC6-203ENST00000518638 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 DNAJC10Q8IXB1 793 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 GPC2Q8N158 579 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 CNBD1Q8NA66 436 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 CCDC74AQ96AQ1 378 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 GCC1Q96CN9 775 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 MASTLQ96GX5 879 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 NPHS2Q9NP85 383 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 POLKQ9UBT6 870 aa8.28□□□□□ -1.08
CCDC6-203ENST00000518638 SLX4Q8IY92 1834 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 PNMA6FA0A0J9YX94 578 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 A0A1W2PP55 124 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 WDR64B1ANS9 1081 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 TRPA1O75762 1119 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 STARD3NLO95772 234 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 PTPRAP18433 802 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 LCE4AQ5TA78 99 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 KIAA0319Q5VV43 1072 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 MAP1SQ66K74 1059 aaPredicted RBP8.27□□□□□ -1.09
CCDC6-203ENST00000518638 ADAMTSL4Q6UY14 1074 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 BEND4Q6ZU67 534 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 RTKN2Q8IZC4 609 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 NXPE3Q969Y0 559 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 HHIPL1Q96JK4 782 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 HHIPQ96QV1 700 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 BHLHE41Q9C0J9 482 aaPredicted RBP8.27□□□□□ -1.09
CCDC6-203ENST00000518638 LACRTQ9GZZ8 138 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 ADAM19Q9H013 955 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 KCNF1Q9H3M0 494 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 KCNK4Q9NYG8 393 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 ZBTB1Q9Y2K1 713 aa8.27□□□□□ -1.09
CCDC6-203ENST00000518638 ANKRD33BA6NCL7 494 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 SART1O43290 800 aaKnown RBP8.26□□□□□ -1.09
CCDC6-203ENST00000518638 SRGNP10124 158 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 CDC27P30260 824 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 HOXA10P31260 410 aaPredicted RBP8.26□□□□□ -1.09
CCDC6-203ENST00000518638 MAPK8P45983 427 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 MFAP1P55081 439 aaKnown RBP8.26□□□□□ -1.09
CCDC6-203ENST00000518638 COL19A1Q14993 1142 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 DUOXA2Q1HG44 320 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 AKAP4Q5JQC9 854 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 PRR5LQ6MZQ0 368 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.26□□□□□ -1.09
CCDC6-203ENST00000518638 CBLL1Q75N03 491 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 JDP2Q8WYK2 163 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 SETDB2Q96T68 719 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 SLC52A2Q9HAB3 445 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 RNF123Q5XPI4 1314 aa8.26□□□□□ -1.09
CCDC6-203ENST00000518638 BCORQ6W2J9 1755 aa8.25□□□□□ -1.09
CCDC6-203ENST00000518638 UBR2Q8IWV8 1755 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms