RNA–Protein interactions for RNA: ENST00000518528.1

PVT1-207, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 624 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-207ENST00000518528 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
PVT1-207ENST00000518528 ZBBXA8MT70 800 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 RAD21O60216 631 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 ZEB2O60315 1214 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 GPR37L1O60883 481 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 SURF6O75683 361 aaKnown RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 GJA9P57773 515 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 ACVR2BQ13705 512 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 TTF1Q15361 905 aaPredicted RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 KIAA1755Q5JYT7 1200 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 MAMDC4Q6UXC1 1216 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 NOL8Q76FK4 1167 aaKnown RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 OTOP2Q7RTS6 562 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 ZNF467Q7Z7K2 595 aaPredicted RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 FAM126BQ8IXS8 530 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 TEX13BQ9BXU2 312 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 UPF3AQ9H1J1 476 aaKnown RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 ABHD16BQ9H3Z7 469 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 EPHX3Q9H6B9 360 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 PPP1R9AQ9ULJ8 1098 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 ADAMTS5Q9UNA0 930 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 YBX2Q9Y2T7 364 aaKnown RBP10.76□□□□□ -0.69
PVT1-207ENST00000518528 MUC3AQ02505 3323 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 CDH23Q9H251 3354 aa10.76□□□□□ -0.69
PVT1-207ENST00000518528 SIPA1L1O43166 1804 aa10.75□□□□□ -0.69
PVT1-207ENST00000518528 SNAI1O95863 264 aaPredicted RBP10.75□□□□□ -0.69
PVT1-207ENST00000518528 ATP2A2P16615 1042 aaKnown RBP10.75□□□□□ -0.69
PVT1-207ENST00000518528 KCNQ1P51787 676 aa10.75□□□□□ -0.69
PVT1-207ENST00000518528 TMEM67Q5HYA8 995 aa10.75□□□□□ -0.69
PVT1-207ENST00000518528 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
PVT1-207ENST00000518528 RIOK1Q9BRS2 568 aaKnown RBP10.75□□□□□ -0.69
PVT1-207ENST00000518528 KANSL2Q9H9L4 492 aa10.75□□□□□ -0.69
PVT1-207ENST00000518528 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
PVT1-207ENST00000518528 MUC6Q6W4X9 2439 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 MYADML2A6NDP7 307 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 CD4P01730 458 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 PFKMP08237 780 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 POU3F3P20264 500 aaPredicted RBP10.74□□□□□ -0.69
PVT1-207ENST00000518528 RABGGTBP53611 331 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 CCDC144BQ3MJ40 725 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 SNRNP48Q6IEG0 339 aaKnown RBP10.74□□□□□ -0.69
PVT1-207ENST00000518528 HLA-CQ95604 372 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 CCDC8Q9H0W5 538 aaPredicted RBP10.74□□□□□ -0.69
PVT1-207ENST00000518528 FBXO28Q9NVF7 368 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.74□□□□□ -0.69
PVT1-207ENST00000518528 FBXO40Q9UH90 709 aa10.74□□□□□ -0.69
PVT1-207ENST00000518528 ZNF214Q9UL59 606 aaPredicted RBP10.74□□□□□ -0.69
PVT1-207ENST00000518528 KIF28PB7ZC32 967 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 ZBED4O75132 1171 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 ACTN1P12814 892 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
PVT1-207ENST00000518528 AKR1B1P15121 316 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 SLC4A3P48751 1232 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 RARSP54136 660 aaKnown RBP10.73□□□□□ -0.69
PVT1-207ENST00000518528 CCL23P55773 120 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 POLA2Q14181 598 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 SLC9C2Q5TAH2 1124 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 ALYREFQ86V81 257 aaKnown RBP10.73□□□□□ -0.69
PVT1-207ENST00000518528 SIAH1Q8IUQ4 282 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 ANKRD35Q8N283 1001 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 SLF1Q9BQI6 1058 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 AP5M1Q9H0R1 490 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 DCP1AQ9NPI6 582 aaPredicted RBP10.73□□□□□ -0.69
PVT1-207ENST00000518528 MTCH2Q9Y6C9 303 aa10.73□□□□□ -0.69
PVT1-207ENST00000518528 DNAJC25-GNG10A0A024R161 153 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 TLL1O43897 1013 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 SUPT20HL2P0C7V6 817 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 PDE6AP16499 860 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 ATP8B2P98198 1209 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 TNFAIP2Q03169 654 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 ITGA7Q13683 1181 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 CLEC10AQ8IUN9 316 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 SLC43A3Q8NBI5 491 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 SSH3Q8TE77 659 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 DYNLL2Q96FJ2 89 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 NOC4LQ9BVI4 516 aaKnown RBP10.72□□□□□ -0.69
PVT1-207ENST00000518528 ANTXR1Q9H6X2 564 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 ATP8A2Q9NTI2 1148 aa10.72□□□□□ -0.69
PVT1-207ENST00000518528 NOP58Q9Y2X3 529 aaKnown RBP10.72□□□□□ -0.69
PVT1-207ENST00000518528 SMIM22K7EJ46 135 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 BCAR3O75815 825 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 CYP2D6P10635 497 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 MYOGP15173 224 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 CDK8P49336 464 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 NKX3-2P78367 333 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 FSCN1Q16658 493 aaKnown RBP10.71□□□□□ -0.69
PVT1-207ENST00000518528 CXCL17Q6UXB2 119 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 ARMCX2Q7L311 632 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 ERC1Q8IUD2 1116 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 TRMT2AQ8IZ69 625 aaKnown RBP10.71□□□□□ -0.69
PVT1-207ENST00000518528 CPXCR1Q8N123 301 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 PRPF38AQ8NAV1 312 aaKnown RBP10.71□□□□□ -0.69
PVT1-207ENST00000518528 CHST13Q8NET6 341 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 REPS2Q8NFH8 660 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 PHOSPHO2Q8TCD6 241 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 SDR42E1Q8WUS8 393 aa10.71□□□□□ -0.69
PVT1-207ENST00000518528 EAF2Q96CJ1 260 aaPredicted RBP10.71□□□□□ -0.69
PVT1-207ENST00000518528 TLR7Q9NYK1 1049 aaKnown RBP10.71□□□□□ -0.69
PVT1-207ENST00000518528 ZNF532Q9HCE3 1301 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms