RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 KCNA10Q16322 511 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 TMEM240Q5SV17 173 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 FAM83BQ5T0W9 1011 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 RASIP1Q5U651 963 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 MFSD5Q6N075 450 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 ERC1Q8IUD2 1116 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 FTSJ3Q8IY81 847 aaKnown RBP13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 NUP133Q8WUM0 1156 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 PPM1EQ8WY54 764 aa13.7□□□□□ -0.22
CTNNA1-205ENST00000517904 MBD4O95243 580 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 CHGBP05060 677 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 CDK7P50613 346 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 C12orf60Q5U649 245 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 C16orf86Q6ZW13 317 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 RHPN1Q8TCX5 695 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 CCDC17Q96LX7 622 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 PRDM12Q9H4Q4 367 aa13.69□□□□□ -0.22
CTNNA1-205ENST00000517904 GREB1LQ9C091 1923 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 SYNGAP1Q96PV0 1343 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 DNAJC25-GNG10A0A024R161 153 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 USP17L12C9JPN9 530 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 USP17L21D6R901 530 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 CSF2RAP15509 400 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ADD2P35612 726 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ADGRE1Q14246 886 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 MAMDC4Q6UXC1 1216 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 GAS2L1Q99501 681 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 NUP88Q99567 741 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 KANSL2Q9H9L4 492 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 GOPCQ9HD26 462 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ATP8A2Q9NTI2 1148 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ZHX1Q9UKY1 873 aaPredicted RBP13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 RIPK3Q9Y572 518 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 MCM3APO60318 1980 aa13.68□□□□□ -0.22
CTNNA1-205ENST00000517904 ELP1O95163 1332 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 RAD21O60216 631 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 DUSP11O75319 330 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 ASGR1P07306 291 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 ACRP10323 421 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 CST5P28325 142 aaPredicted RBP13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 COPB2P35606 906 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 PPIGQ13427 754 aaKnown RBP eCLIP13.67□□□□□ -0.227e-6■■□□□ 12.3
CTNNA1-205ENST00000517904 AKNAD1Q5T1N1 836 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 SNRNP48Q6IEG0 339 aaKnown RBP13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 CCDC129Q6ZRS4 1044 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 FGD4Q96M96 766 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 GLT1D1Q96MS3 346 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 ASB2Q96Q27 587 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 TEX13BQ9BXU2 312 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 PPP1R12CQ9BZL4 782 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 GBF1Q92538 1859 aa13.67□□□□□ -0.22
CTNNA1-205ENST00000517904 MROH7Q68CQ1 1323 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 ZBED9Q6R2W3 1325 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 APBB1O00213 710 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 C6orf222P0C671 652 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 ACVR2BQ13705 512 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 CTR9Q6PD62 1173 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 FAM126BQ8IXS8 530 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 ADAMTS19Q8TE59 1207 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 DDX11Q96FC9 970 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 SLF1Q9BQI6 1058 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 PAG1Q9NWQ8 432 aa13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 CXXC1Q9P0U4 656 aaPredicted RBP13.66□□□□□ -0.22
CTNNA1-205ENST00000517904 A0A0U1RQG5 324 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 ARVCFO00192 962 aa13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 CTAGE5O15320 804 aa13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 GJA9P57773 515 aa13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 CCDC85BQ15834 202 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 ZNF467Q7Z7K2 595 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 TMEM199Q8N511 208 aa13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 UPF3AQ9H1J1 476 aaKnown RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.65□□□□□ -0.22
CTNNA1-205ENST00000517904 MYH7P12883 1935 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 CCER2I3L3R5 266 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 IFIT2P09913 472 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 CYP2C18P33260 490 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 HSP90AB4PQ58FF6 505 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 GNASQ5JWF2 1037 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 CCDC174Q6PII3 467 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 AMOTL1Q8IY63 956 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 PCSK9Q8NBP7 692 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 KIF1BPQ96EK5 621 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 KATNBL1Q9H079 304 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 BCL11AQ9H165 835 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 BOLA2Q9H3K6 86 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 YBX2Q9Y2T7 364 aaKnown RBP13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 SLC4A4Q9Y6R1 1079 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 UMODL1Q5DID0 1318 aa13.64□□□□□ -0.23
CTNNA1-205ENST00000517904 F5H6K3 240 aa13.63□□□□□ -0.23
CTNNA1-205ENST00000517904 ATP2A1O14983 1001 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms