RNA–Protein interactions for RNA: ENST00000517619.5

SPIDR-202, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3

Gene SPIDR, Length 335 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-202ENST00000517619 LRRFIP1Q32MZ4 808 aaKnown RBP11.42□□□□□ -0.58
SPIDR-202ENST00000517619 RNF180Q86T96 592 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 ZNF444Q8N0Y2 327 aaPredicted RBP11.42□□□□□ -0.58
SPIDR-202ENST00000517619 CPXCR1Q8N123 301 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 LRRC47Q8N1G4 583 aaKnown RBP11.42□□□□□ -0.58
SPIDR-202ENST00000517619 PRPF38AQ8NAV1 312 aaKnown RBP11.42□□□□□ -0.58
SPIDR-202ENST00000517619 KIFC2Q96AC6 838 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 CEP95Q96GE4 821 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 ZNF287Q9HBT7 754 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 PDLIM7Q9NR12 457 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 PHF24Q9UPV7 400 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 CNPY2Q9Y2B0 182 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 STXBP5LQ9Y2K9 1186 aa11.42□□□□□ -0.58
SPIDR-202ENST00000517619 PLIN4Q96Q06 1357 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 LRRC37A2A6NM11 1700 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 PATL2C9JE40 543 aaKnown RBP11.41□□□□□ -0.58
SPIDR-202ENST00000517619 ERC2O15083 957 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 TTLL1O95922 423 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 C1orf53Q5VUE5 145 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 SH3RF1Q7Z6J0 888 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 IFNL3Q8IZI9 196 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 PI4K2BQ8TCG2 481 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 OTUD7AQ8TE49 926 aaPredicted RBP11.41□□□□□ -0.58
SPIDR-202ENST00000517619 BADQ92934 168 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 DDX11Q96FC9 970 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 FSD1Q9BTV5 496 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 NACAP1Q9BZK3 213 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 RAVER2Q9HCJ3 691 aaKnown RBP11.41□□□□□ -0.58
SPIDR-202ENST00000517619 MTMR4Q9NYA4 1195 aa11.41□□□□□ -0.58
SPIDR-202ENST00000517619 CTDP1Q9Y5B0 961 aaPredicted RBP11.41□□□□□ -0.58
SPIDR-202ENST00000517619 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 DNAJC25-GNG10A0A024R161 153 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 A0A1W2PQ45 241 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-202ENST00000517619 A0A1W2PQY0 241 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 TRIM43BA6NCK2 446 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 DLL1O00548 723 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 ATP2A1O14983 1001 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 ZBED4O75132 1171 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 ADAMTS4O75173 837 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 TSPY3P0CV98 308 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 TSPY8P0CW00 308 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 TLE2Q04725 743 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 PDE4BQ07343 736 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 SHHQ15465 462 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 C9orf50Q5SZB4 431 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 MSL3Q8N5Y2 521 aaKnown RBP11.4□□□□□ -0.58
SPIDR-202ENST00000517619 MKL1Q969V6 931 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 TRIM43Q96BQ3 446 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-202ENST00000517619 FAM161BQ96MY7 647 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 NAPBQ9H115 298 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 SLC38A10Q9HBR0 1119 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 FEM1BQ9UK73 627 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 ZHX1Q9UKY1 873 aaPredicted RBP11.4□□□□□ -0.58
SPIDR-202ENST00000517619 ISY1Q9ULR0 285 aaKnown RBP11.4□□□□□ -0.58
SPIDR-202ENST00000517619 PCDHB15Q9Y5E8 787 aa11.4□□□□□ -0.58
SPIDR-202ENST00000517619 SYNGAP1Q96PV0 1343 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 LCTP09848 1927 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 POTEB2H3BUK9 544 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 PQBP1O60828 265 aaKnown RBP11.39□□□□□ -0.59
SPIDR-202ENST00000517619 SNAI1O95863 264 aaPredicted RBP11.39□□□□□ -0.59
SPIDR-202ENST00000517619 SLC3A2P08195 630 aaKnown RBP11.39□□□□□ -0.59
SPIDR-202ENST00000517619 CLTBP09497 229 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 MX1P20591 662 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 ITGB8P26012 769 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 PPARAQ07869 468 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 ZNF697Q5TEC3 545 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 SLFN13Q68D06 897 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 MAMDC4Q6UXC1 1216 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 ANKRD35Q8N283 1001 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 GMCL1P1Q8NEA9 526 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 NEDD1Q8NHV4 660 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 GUCD1Q96NT3 240 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 HOMER2Q9NSB8 354 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 SYNPO2Q9UMS6 1093 aa11.39□□□□□ -0.59
SPIDR-202ENST00000517619 ADCY6O43306 1168 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 BMP3P12645 472 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 ACLYP53396 1101 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 OAZ1P54368 228 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 TFAP4Q01664 338 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 ZMYM1Q5SVZ6 1142 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 FAM109BQ6ICB4 259 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-202ENST00000517619 ZNF467Q7Z7K2 595 aaPredicted RBP11.38□□□□□ -0.59
SPIDR-202ENST00000517619 CHMP4CQ96CF2 233 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 STARD7Q9NQZ5 370 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 FBXO40Q9UH90 709 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 FAM184BQ9ULE4 1060 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 TACC3Q9Y6A5 838 aa11.38□□□□□ -0.59
SPIDR-202ENST00000517619 A0A0C4DFX4 3053 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 MYADML2A6NDP7 307 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 TMEM232C9JQI7 657 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 STAT2P52630 851 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 IKQ13123 557 aaPredicted RBP11.37□□□□□ -0.59
SPIDR-202ENST00000517619 ACVR2BQ13705 512 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 CCDC144BQ3MJ40 725 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 CCDC129Q6ZRS4 1044 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.37□□□□□ -0.59
SPIDR-202ENST00000517619 ARMCX2Q7L311 632 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 CHST13Q8NET6 341 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 NUP133Q8WUM0 1156 aa11.37□□□□□ -0.59
SPIDR-202ENST00000517619 FGD4Q96M96 766 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms