RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 ZBTB8AQ96BR9 441 aa0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 MEGF9Q9H1U4 602 aa0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 PRDM13Q9H4Q3 707 aa0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 KLK14Q9P0G3 267 aa0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 EBF1Q9UH73 591 aa0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 FNDC3AQ9Y2H6 1198 aaKnown RBP0.22□□□□□ -2.37
SNORA40.16-201ENST00000517238 SYNGAP1Q96PV0 1343 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 NRDCO43847 1150 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 PPP1R12BO60237 982 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 TRPA1O75762 1119 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 AP1G2O75843 785 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 NEFMP07197 916 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 ACPPP15309 386 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 ACO1P21399 889 aaKnown RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 ACRV1P26436 265 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 POLGP54098 1239 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 PSME1Q06323 249 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 SMAD4Q13485 552 aaKnown RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 SLFNL1Q499Z3 407 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 TTC39BQ5VTQ0 682 aaPredicted RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 AGBL4Q5VU57 503 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 CYB5RLQ6IPT4 315 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 TCTN3Q6NUS6 607 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 CEP128Q6ZU80 1094 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 MEPCEQ7L2J0 689 aaKnown RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 TXNDC5Q8NBS9 432 aaKnown RBP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 KCNV2Q8TDN2 545 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZNF414Q96IQ9 312 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 GNRHR2Q96P88 292 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 ICKQ9UPZ9 632 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 CORINQ9Y5Q5 1042 aa0.21□□□□□ -2.38
SNORA40.16-201ENST00000517238 MUC5ACP98088 5654 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 CACNA1IQ9P0X4 2223 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 NFKBIEO00221 500 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 CELA3AP09093 270 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 SLFN14P0C7P3 912 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 RASA1P20936 1047 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 TNK2Q07912 1038 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZDHHC17Q8IUH5 632 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 VRK3Q8IV63 474 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 TMEM102Q8N9M5 508 aaPredicted RBP0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 BOLLQ8N9W6 283 aaKnown RBP0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 GIMAP8Q8ND71 665 aaPredicted RBP0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 NOX5Q96PH1 765 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 RNF38Q9H0F5 515 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 PCDHA11Q9Y5I1 949 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 KCNMB2Q9Y691 235 aa0.2□□□□□ -2.38
SNORA40.16-201ENST00000517238 CYP2E1P05181 493 aaPredicted RBP0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 NCAM1P13591 858 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 LIG1P18858 919 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 RPL13P26373 211 aaKnown RBP0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 MAPKAPK2P49137 400 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 CLK2P49760 499 aaKnown RBP0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 CBX2Q14781 532 aaPredicted RBP0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 GAB4Q2WGN9 574 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 B3GNT8Q7Z7M8 397 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 ASAP3Q8TDY4 903 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 LINC01599Q8WXQ3 324 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 DZANK1Q9NVP4 752 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 KANSL3Q9P2N6 904 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 EGFL7Q9UHF1 273 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 PLA2G2DQ9UNK4 145 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 INSL6Q9Y581 213 aa0.19□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZNF185O15231 689 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 B4GALT4O60513 344 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 RPS6KA4O75676 772 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 EYA4O95677 639 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 CXCR3P49682 368 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 HNRNPA3P51991 378 aaKnown RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 ELLP55199 621 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 SRSF4Q08170 494 aaKnown RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 DGKZQ13574 1117 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 TRIP4Q15650 581 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 KBTBD2Q8IY47 623 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZNF48Q96MX3 618 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 PLCD4Q9BRC7 762 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 TRIT1Q9H3H1 467 aaKnown RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 ZNF703Q9H7S9 590 aaPredicted RBP0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 PARPBPQ9NWS1 579 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 PCDHGA11Q9Y5H2 935 aa0.18□□□□□ -2.38
SNORA40.16-201ENST00000517238 C9orf118A6NHY6 69 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 UBAP1LF5GYI3 381 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 DDX3XO00571 662 aaKnown RBP eCLIP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 RBMXL2O75526 392 aaKnown RBP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 CYP1A1P04798 512 aaPredicted RBP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 USP17L8P0C7I0 530 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 PTH2RP49190 550 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 DDR1Q08345 913 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 LAPTM5Q13571 262 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 NR1I3Q14994 352 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 HECTD2Q5U5R9 776 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 KRTAP5-10Q6L8G5 202 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 PHTF2Q8N3S3 785 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 SMARCC2Q8TAQ2 1214 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 CHMP7Q8WUX9 453 aaPredicted RBP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 TAF15Q92804 592 aaKnown RBP eCLIP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 WDR89Q96FK6 387 aaPredicted RBP0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 FAM89AQ96GI7 184 aa0.17□□□□□ -2.38
SNORA40.16-201ENST00000517238 C2orf49Q9BVC5 232 aaPredicted RBP0.17□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms