RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 CYP2C8P10632 490 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 XBP1P17861 261 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RXRAP19793 462 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DSG3P32926 999 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SLC16A2P36021 539 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ANP32AP39687 249 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NOVP48745 357 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RCAN1P53805 252 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HERVK_113P62684 666 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCT2P78371 535 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SSRP1Q08945 709 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DGKZQ13574 1117 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TRIM29Q14134 588 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GPAT2Q6NUI2 795 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCDC174Q6PII3 467 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 APOA5Q6Q788 366 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HOMER1Q86YM7 354 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RAB11FIP4Q86YS3 637 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CPXCR1Q8N123 301 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FAM43AQ8N2R8 423 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FBXL16Q8N461 479 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCDC82Q8N4S0 544 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GPRC5AQ8NFJ5 357 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PIBF1Q8WXW3 757 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 WASF1Q92558 559 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 LARP6Q9BRS8 491 aaKnown RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 UBA5Q9GZZ9 404 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GPHNQ9NQX3 736 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SH2B1Q9NRF2 756 aaPredicted RBP6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RNF186Q9NXI6 227 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SAGE1Q9NXZ1 904 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PPP1R9AQ9ULJ8 1098 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 RABGAP1Q9Y3P9 1069 aa6.32□□□□□ -1.4
SCARNA16.4-201ENST00000516956 IGF2BP3O00425 579 aaKnown RBP eCLIP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TLR2O60603 784 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FMNL1O95466 1100 aaPredicted RBP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SLC25A27O95847 323 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 HOXD10P28358 340 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SMARCA1P28370 1054 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PDIA3P30101 505 aaKnown RBP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 STAT3P40763 770 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TROAPQ12815 778 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CRHR2Q13324 411 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SNRNP48Q6IEG0 339 aaKnown RBP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TTBK2Q6IQ55 1244 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 NCAPG2Q86XI2 1143 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FBXO11Q86XK2 927 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ADGRF4Q8IZF3 695 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ANKRD13CQ8N6S4 541 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FAM184AQ8NB25 1140 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCDC12Q8WUD4 166 aaPredicted RBP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CUL5Q93034 780 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 COA7Q96BR5 231 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ATG4CQ96DT6 458 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ERO1AQ96HE7 468 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PTPN18Q99952 460 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SENP2Q9HC62 589 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FBXO28Q9NVF7 368 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SLC5A4Q9NY91 659 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FBXO40Q9UH90 709 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CPA4Q9UI42 421 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MAD2L2Q9UI95 211 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BRPF3Q9ULD4 1205 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CCPG1Q9ULG6 757 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PRR12Q9ULL5 1215 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 OTOFQ9HC10 1997 aa6.31□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PNMA6FA0A0J9YX94 578 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PALM3A6NDB9 673 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SPDYE16A6NNV3 312 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 B4DLN1 442 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 VWA5AO00534 786 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ZBTB5O15062 677 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 PFKFB2O60825 505 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FKTNO75072 461 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ECM2O94769 699 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SNHG28P0DPA3 235 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ALAS1P13196 640 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MAPK4P31152 587 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CTCFP49711 727 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MRPL12P52815 198 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 OAZ1P54368 228 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FCGRTP55899 365 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 SP3Q02447 781 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TOB2Q14106 344 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 KCTD2Q14681 263 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 CDC37Q16543 378 aaPredicted RBP6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 FAM110CQ1W6H9 321 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TKFCQ3LXA3 575 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 USH1GQ495M9 461 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 KIAA1755Q5JYT7 1200 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 BTNL9Q6UXG8 535 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 TMTC3Q6ZXV5 915 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 MCF2L2Q86YR7 1114 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 ANKRD35Q8N283 1001 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 STAG2Q8N3U4 1231 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 IL17RAQ96F46 866 aa6.3□□□□□ -1.4
SCARNA16.4-201ENST00000516956 DDX11Q96FC9 970 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms