RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 ZNF281Q9Y2X9 895 aa1.09□□□□□ -2.23
RNU6-539P-201ENST00000516665 TMEM191CA6NGB0 347 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 GCP02774 474 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 ARL4AP40617 200 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZAP70P43403 619 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 PPP2CBP62714 309 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 PPP2CAP67775 309 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 SLFN13Q68D06 897 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 LETMD1Q6P1Q0 360 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 RD3Q7Z3Z2 195 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 FIBCD1Q8N539 461 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 TMEM255BQ8WV15 326 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 VTI1AQ96AJ9 217 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZBTB9Q96C00 473 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 MAP6Q96JE9 813 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 HHIPL1Q96JK4 782 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 AK7Q96M32 723 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF778Q96MU6 729 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 KRT82Q9NSB4 513 aa1.08□□□□□ -2.24
RNU6-539P-201ENST00000516665 A6NHS1 94 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 GAS8-AS1O95177 125 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 GSTP1P09211 210 aaKnown RBP1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 EDN3P14138 238 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 KIR2DL1P43626 348 aaPredicted RBP1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 KIR2DL2P43627 348 aaPredicted RBP1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF81P51508 661 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 KRTAP10-3P60369 221 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 ARHGEF18Q6ZSZ5 1173 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 RNF38Q9H0F5 515 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 RBM19Q9Y4C8 960 aaKnown RBP1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 COX11Q9Y6N1 276 aa1.07□□□□□ -2.24
RNU6-539P-201ENST00000516665 ASGR2P07307 311 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 BRD2P25440 801 aaKnown RBP1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 RPL10P27635 214 aaKnown RBP1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 SEC13P55735 322 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 STRIP1Q5VSL9 837 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF746Q6NUN9 644 aaPredicted RBP1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 FBXL22Q6P050 247 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 CDC37L1Q7L3B6 337 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 SMARCC2Q8TAQ2 1214 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 EDAQ92838 391 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 LCORQ96JN0 433 aaPredicted RBP1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 GNRHR2Q96P88 292 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 SAP130Q9H0E3 1048 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 PRDM13Q9H4Q3 707 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 FBRSQ9HAH7 460 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 PICK1Q9NRD5 415 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 MTMR4Q9NYA4 1195 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZMYM5Q9UJ78 669 aa1.06□□□□□ -2.24
RNU6-539P-201ENST00000516665 FOXO3O43524 673 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 SMARCA5O60264 1052 aaPredicted RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 NCAM1P13591 858 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 PRKCAP17252 672 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 RPL13P26373 211 aaKnown RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF157P51786 506 aaPredicted RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 RTP1P59025 263 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 FOXF2Q12947 444 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 SLBPQ14493 270 aaKnown RBP eCLIP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 HSF5Q4G112 596 aaPredicted RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZBTB37Q5TC79 503 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 AGBL4Q5VU57 503 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 TCTN3Q6NUS6 607 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 HDGFL2Q7Z4V5 671 aaPredicted RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 CDH24Q86UP0 819 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 NFATC2IPQ8NCF5 419 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 XAGE3Q8WTP9 111 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 KCNB2Q92953 911 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 NUDT16Q96DE0 195 aaKnown RBP1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 COX4I2Q96KJ9 171 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 C1QTNF7Q9BXJ2 289 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 GPR62Q9BZJ7 368 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF576Q9H609 170 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 SNRKQ9NRH2 765 aa1.05□□□□□ -2.24
RNU6-539P-201ENST00000516665 DCDC2CA8MYV0 355 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 TNFRSF10BO14763 440 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 CYP7A1P22680 504 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 CLK3P49761 638 aaKnown RBP1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 CYP4F8P98187 520 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 HYAL1Q12794 435 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 LAPTM5Q13571 262 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 MBNL2Q5VZF2 373 aaKnown RBP1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 WAPLQ7Z5K2 1190 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 C12orf40Q86WS4 652 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 CCNJLQ8IV13 435 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 ANKS1AQ92625 1134 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 PMEPA1Q969W9 287 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 MBD6Q96DN6 1003 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 SYNPO2LQ9H987 977 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 TAF6LQ9Y6J9 622 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 SPATA31A6Q5VVP1 1343 aa1.04□□□□□ -2.24
RNU6-539P-201ENST00000516665 USP17L3A6NCW0 530 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 USP17L4A6NCW7 530 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZBTB39O15060 712 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 KIAA0355O15063 1070 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 THBS2P35442 1172 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 NR1I3Q14994 352 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 NKG7Q16617 165 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 ZNF628Q5EBL2 1059 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 USP17L2Q6R6M4 530 aa1.03□□□□□ -2.24
RNU6-539P-201ENST00000516665 DHX30Q7L2E3 1194 aaKnown RBP eCLIP1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms