RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 GPATCH4Q5T3I0 446 aaKnown RBP7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 WDR78Q5VTH9 848 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CENPQQ7L2Z9 268 aaPredicted RBP7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NECAB2Q7Z6G3 386 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZNF467Q7Z7K2 595 aaPredicted RBP7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DPP9Q86TI2 863 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NCAPG2Q86XI2 1143 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 LRRC47Q8N1G4 583 aaKnown RBP7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CHST13Q8NET6 341 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CHURC1Q8WUH1 139 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DEFB118Q96PH6 123 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SLC38A10Q9HBR0 1119 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CLIP2Q9UDT6 1046 aa7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CTDP1Q9Y5B0 961 aaPredicted RBP7.08□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PFASO15067 1338 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 WDR19Q8NEZ3 1342 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SYNGAP1Q96PV0 1343 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 A0A1W2PPC1 479 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZNF213O14771 459 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RANBP6O60518 1105 aaKnown RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZBED4O75132 1171 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ECM2O94769 699 aaPredicted RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TOP1P11387 765 aaKnown RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CACNB2Q08289 660 aaPredicted RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PLS1Q14651 629 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SLFN13Q68D06 897 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SNRNP48Q6IEG0 339 aaKnown RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CWC27Q6UX04 472 aaKnown RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MFSD6Q6ZSS7 791 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MAML3Q96JK9 1138 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MMP19Q99542 508 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 KRT23Q9C075 422 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NBPF3Q9H094 633 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TOMM22Q9NS69 142 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 FBXO28Q9NVF7 368 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DDX20Q9UHI6 824 aaKnown RBP7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NR2E3Q9Y5X4 410 aa7.07□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NEDD4P46934 1319 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ALPK3Q96L96 1907 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DNAJC25-GNG10A0A024R161 153 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 DNM1LO00429 736 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SEPT4O43236 478 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RAD21O60216 631 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PDHBP11177 359 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PDE4AP27815 886 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CTDSPL2Q05D32 466 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 BMP2KLQ5H9B9 411 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 FAM47AQ5JRC9 791 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MAMDC4Q6UXC1 1216 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 BTNL9Q6UXG8 535 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TBC1D10CQ8IV04 446 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NPLOC4Q8TAT6 608 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 KIFC2Q96AC6 838 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MTA3Q9BTC8 594 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RANBP17Q9H2T7 1088 aaKnown RBP7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ACAD9Q9H845 621 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 IL17RBQ9NRM6 502 aa7.06□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TMEM232C9JQI7 657 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SGSM2O43147 1006 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 MYCP01106 439 aaPredicted RBP7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TFRCP02786 760 aaKnown RBP7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ICAM1P05362 532 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 COL6A1P12109 1028 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 AKR1A1P14550 325 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TRDNQ13061 729 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 IKQ13123 557 aaPredicted RBP7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CCL14Q16627 93 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CCDC96Q2M329 555 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZNF792Q3KQV3 632 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ASPRV1Q53RT3 343 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 STK11IPQ8N1F8 1099 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 NUP88Q99567 741 aaPredicted RBP7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TINF2Q9BSI4 451 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 C11orf49Q9H6J7 331 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CNPY2Q9Y2B0 182 aa7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 U3KPZ7 1027 aaPredicted RBP7.05□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZNF536O15090 1300 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TNKSO95271 1327 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 LCTP09848 1927 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 KBTBD13C9JR72 458 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PEX10O60683 326 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 COBLO75128 1261 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RARBP10826 455 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CHMLP26374 656 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CCND3P30281 292 aaPredicted RBP7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 HAND2P61296 217 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ZNF543Q08ER8 600 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 TRIM32Q13049 653 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SART3Q15020 963 aaKnown RBP7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RRP12Q5JTH9 1297 aaKnown RBP7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 SYDE2Q5VT97 1194 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 C1orf53Q5VUE5 145 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 LHX8Q68G74 356 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 CASC1Q6TDU7 716 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 RALYLQ86SE5 291 aaKnown RBP7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ANKRD35Q8N283 1001 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 ARRDC4Q8NCT1 418 aa7.04□□□□□ -1.28
SCARNA18.1-201ENST00000516330 PNMA1Q8ND90 353 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms