RNA–Protein interactions for RNA: ENST00000515881.5

DDR1-280, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 956 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-280ENST00000515881 CHRDL2Q6WN34 429 aa23.18■■□□□ 1.3
DDR1-280ENST00000515881 PFASO15067 1338 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 ATP2A1O14983 1001 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 RANBP6O60518 1105 aaKnown RBP23.17■■□□□ 1.3
DDR1-280ENST00000515881 ZBED4O75132 1171 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 PGK2P07205 417 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 FGRP09769 529 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 BMP3P12645 472 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 IL17RBQ9NRM6 502 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 STX8Q9UNK0 236 aa23.17■■□□□ 1.3
DDR1-280ENST00000515881 NMT2O60551 498 aa23.16■■□□□ 1.3
DDR1-280ENST00000515881 GMCL1Q96IK5 515 aa23.16■■□□□ 1.3
DDR1-280ENST00000515881 SLC38A10Q9HBR0 1119 aa23.16■■□□□ 1.3
DDR1-280ENST00000515881 CTDP1Q9Y5B0 961 aaPredicted RBP23.16■■□□□ 1.3
DDR1-280ENST00000515881 MFAP1P55081 439 aaKnown RBP23.15■■□□□ 1.3
DDR1-280ENST00000515881 ZNF792Q3KQV3 632 aa23.15■■□□□ 1.3
DDR1-280ENST00000515881 CPXCR1Q8N123 301 aa23.15■■□□□ 1.3
DDR1-280ENST00000515881 ISY1Q9ULR0 285 aaKnown RBP23.15■■□□□ 1.3
DDR1-280ENST00000515881 DIS3Q9Y2L1 958 aaKnown RBP23.15■■□□□ 1.3
DDR1-280ENST00000515881 RIPK3Q9Y572 518 aa23.15■■□□□ 1.3
DDR1-280ENST00000515881 TMEM232C9JQI7 657 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 SLC1A4P43007 532 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 NOVP48745 357 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 PRAMEF19Q5SWL8 479 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 C7orf61Q8IZ16 206 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 RAVER2Q9HCJ3 691 aaKnown RBP23.14■■□□□ 1.29
DDR1-280ENST00000515881 TOMM22Q9NS69 142 aa23.14■■□□□ 1.29
DDR1-280ENST00000515881 COL11A1P12107 1806 aaPredicted RBP23.13■■□□□ 1.29
DDR1-280ENST00000515881 SEPT4O43236 478 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 MCCP23508 829 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 STAT2P52630 851 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 OAZ1P54368 228 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 FAM160B2Q86V87 743 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 DIAPH3Q9NSV4 1193 aa23.13■■□□□ 1.29
DDR1-280ENST00000515881 RBM27Q9P2N5 1060 aaKnown RBP23.13■■□□□ 1.29
DDR1-280ENST00000515881 FDX1P10109 184 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 SLC4A3P48751 1232 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 HAND2P61296 217 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 IRX6P78412 446 aaPredicted RBP23.12■■□□□ 1.29
DDR1-280ENST00000515881 RRP12Q5JTH9 1297 aaKnown RBP23.12■■□□□ 1.29
DDR1-280ENST00000515881 CHURC1Q8WUH1 139 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 STAG1Q8WVM7 1258 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 CHMP4CQ96CF2 233 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 TINF2Q9BSI4 451 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 PRO3102Q9H379 93 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 NRBP1Q9UHY1 535 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 MYH4Q9Y623 1939 aa23.12■■□□□ 1.29
DDR1-280ENST00000515881 CEP290O15078 2479 aa23.11■■□□□ 1.29
DDR1-280ENST00000515881 HIP1O00291 1037 aa23.11■■□□□ 1.29
DDR1-280ENST00000515881 DNM1LO00429 736 aa23.11■■□□□ 1.29
DDR1-280ENST00000515881 FXR1P51114 621 aaKnown RBP eCLIP23.11■■□□□ 1.29
DDR1-280ENST00000515881 IKQ13123 557 aaPredicted RBP23.11■■□□□ 1.29
DDR1-280ENST00000515881 CWC27Q6UX04 472 aaKnown RBP23.11■■□□□ 1.29
DDR1-280ENST00000515881 DDX11Q96FC9 970 aa23.11■■□□□ 1.29
DDR1-280ENST00000515881 DNAJC25-GNG10A0A024R161 153 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 PLA2G6O60733 806 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 PCP11498 1178 aaKnown RBP23.1■■□□□ 1.29
DDR1-280ENST00000515881 ANO1Q5XXA6 986 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 RCSD1Q6JBY9 416 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 KCTD1Q719H9 257 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.1■■□□□ 1.29
DDR1-280ENST00000515881 TBC1D10CQ8IV04 446 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 CHST13Q8NET6 341 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 TCP11L1Q9NUJ3 509 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 FBXO40Q9UH90 709 aa23.1■■□□□ 1.29
DDR1-280ENST00000515881 PDE4AP27815 886 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 LRRC26Q2I0M4 334 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 AKNAD1Q5T1N1 836 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 MFSD6Q6ZSS7 791 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 RASGRP2Q7LDG7 609 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 ARRDC4Q8NCT1 418 aa23.09■■□□□ 1.29
DDR1-280ENST00000515881 SENP6Q9GZR1 1112 aaPredicted RBP23.09■■□□□ 1.29
DDR1-280ENST00000515881 ZMYND8Q9ULU4 1186 aaPredicted RBP23.09■■□□□ 1.29
DDR1-280ENST00000515881 TOP1P11387 765 aaKnown RBP23.08■■□□□ 1.29
DDR1-280ENST00000515881 GJC2Q5T442 439 aaPredicted RBP23.08■■□□□ 1.29
DDR1-280ENST00000515881 MSL3Q8N5Y2 521 aaKnown RBP23.08■■□□□ 1.29
DDR1-280ENST00000515881 DCAF4Q8WV16 495 aa23.08■■□□□ 1.29
DDR1-280ENST00000515881 RNF41Q9H4P4 317 aaPredicted RBP23.08■■□□□ 1.29
DDR1-280ENST00000515881 MTMR7Q9Y216 660 aa23.08■■□□□ 1.29
DDR1-280ENST00000515881 ALPK3Q96L96 1907 aa23.08■■□□□ 1.28
DDR1-280ENST00000515881 ZNF536O15090 1300 aa23.08■■□□□ 1.28
DDR1-280ENST00000515881 TAL1P17542 331 aaPredicted RBP23.07■■□□□ 1.28
DDR1-280ENST00000515881 CCDC96Q2M329 555 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 ANKRD35Q8N283 1001 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 TMEM47Q9BQJ4 181 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 HOMER2Q9NSB8 354 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 CNPY2Q9Y2B0 182 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 FRMPD3Q5JV73 1810 aa23.07■■□□□ 1.28
DDR1-280ENST00000515881 KBTBD13C9JR72 458 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 ZNF213O14771 459 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 SYN1P17600 705 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 MAMDC4Q6UXC1 1216 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 ZNF467Q7Z7K2 595 aaPredicted RBP23.06■■□□□ 1.28
DDR1-280ENST00000515881 AGBL1Q96MI9 1066 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 PRR12Q9ULL5 1215 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 SYNGAP1Q96PV0 1343 aa23.06■■□□□ 1.28
DDR1-280ENST00000515881 ZNF865P0CJ78 1059 aaPredicted RBP23.05■■□□□ 1.28
DDR1-280ENST00000515881 TTC22Q5TAA0 569 aa23.05■■□□□ 1.28
DDR1-280ENST00000515881 ESR2Q92731 530 aa23.05■■□□□ 1.28
DDR1-280ENST00000515881 DSCC1Q9BVC3 393 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms