RNA–Protein interactions for RNA: ENST00000515854.5

ATP2C1-223, Transcript of ATPase secretory pathway Ca2+ transporting 1, human

TSL 4

Gene ATP2C1, Length 561 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP2C1-223	ENST00000515854	GNL2	Q13823	731 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DSG2	Q14126	1118 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	R3HDM1	Q15032	1099 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	STK38	Q15208	465 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SF3A1	Q15459	793 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NPY5R	Q15761	445 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SLC35G1	Q2M3R5	365 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DALRD3	Q5D0E6	543 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RILPL1	Q5EBL4	403 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PPP4R3B	Q5MIZ7	849 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TATDN1	Q6P1N9	297 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RBM43	Q6ZSC3	357 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FOXP4	Q8IVH2	680 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CCAR1	Q8IX12	1150 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FAM177A1	Q8N128	213 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	STAG2	Q8N3U4	1231 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MTMR14	Q8NCE2	650 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	AGBL3	Q8NEM8	1001 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	BICD2	Q8TD16	824 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	OXER1	Q8TDS5	423 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	UPF1	Q92900	1129 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TNFRSF25	Q93038	417 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CEP95	Q96GE4	821 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PRMT6	Q96LA8	375 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CCDC17	Q96LX7	622 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SPZ1	Q9BXG8	430 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NUP62CL	Q9H1M0	184 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TSPY26P	Q9H489	355 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	GOLPH3L	Q9H4A5	285 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CLSTN2	Q9H4D0	955 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TDRD3	Q9H7E2	651 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DNAJC18	Q9H819	358 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	SH3GLB2	Q9NR46	395 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	EIF4ENIF1	Q9NRA8	985 aa	Known RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DACT1	Q9NYF0	836 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	VPS54	Q9P1Q0	977 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PI4KB	Q9UBF8	816 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	HDAC9	Q9UKV0	1011 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	STX8	Q9UNK0	236 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MORC2	Q9Y6X9	1032 aa	Predicted RBP	5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ECM29	Q5VYK3	1845 aa		5.17	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ATRNL1	Q5VV63	1379 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ADAMTSL1	Q8N6G6	1762 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FAM237A	A0A1B0GTK4	181 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	hCG_1642624	A0A1W2PR95	340 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KLRF2	D3W0D1	207 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NFKBIE	O00221	500 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CTAGE5	O15320	804 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CYTH3	O43739	400 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CUTA	O60888	179 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TTLL1	O95922	423 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PARP1	P09874	1014 aa	Known RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PDHB	P11177	359 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	VEGFA	P15692	232 aa	Predicted RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CMA1	P23946	247 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KRT2	P35908	639 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MLLT3	P42568	568 aa	Predicted RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ME1	P48163	572 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MMP14	P50281	582 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CACNB3	P54284	484 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	KCNC4	Q03721	635 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FAM160A1	Q05DH4	1040 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CXCL9	Q07325	125 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NR5A1	Q13285	461 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	DLGAP5	Q15398	846 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MAP3K11	Q16584	847 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FKBP1C	Q5VVH2	108 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	CCDC73	Q6ZRK6	1079 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NIM1K	Q8IY84	436 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FMR1NB	Q8N0W7	255 aa	Predicted RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	JMY	Q8N9B5	988 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FSIP1	Q8NA03	581 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	FAM151A	Q8WW52	585 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MRPS27	Q92552	414 aa	Known RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MKL1	Q969V6	931 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZBED3	Q96IU2	234 aa	Predicted RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PSMG3-AS1	Q96PY0	264 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PANK2	Q9BZ23	570 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TAOK3	Q9H2K8	898 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TNMD	Q9H2S6	317 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	RIOX1	Q9H6W3	641 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	BRMS1	Q9HCU9	246 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	NYAP2	Q9P242	653 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	ZNF70	Q9UC06	446 aa	Predicted RBP	5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MYH1	P12882	1939 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	MYH15	Q9Y2K3	1946 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	LTBP3	Q9NS15	1303 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PSME4	Q14997	1843 aa		5.16	□□□□□ -1.58
ATP2C1-223	ENST00000515854	TCHH	Q07283	1943 aa		5.15	□□□□□ -1.58
ATP2C1-223	ENST00000515854	PSD	A5PKW4	1024 aa	Predicted RBP	5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	USP17L5	A8MUK1	530 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	hCG_1984214	I3L0E3	225 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854		M0R2N6	131 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	STXBP3	O00186	592 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	DPYSL4	O14531	572 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	GOLGA8H	P0CJ92	632 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	SLURP2	P0DP57	97 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	PTPRE	P23469	700 aa		5.15	□□□□□ -1.59
ATP2C1-223	ENST00000515854	CALML3	P27482	149 aa		5.15	□□□□□ -1.59

Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms