RNA–Protein interactions for RNA: ENST00000515824.1

LMNA-225, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 393 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-225ENST00000515824 CHMP4CQ96CF2 233 aa22.81■■□□□ 1.24
LMNA-225ENST00000515824 ZKSCAN3Q9BRR0 538 aa22.81■■□□□ 1.24
LMNA-225ENST00000515824 ESYT1Q9BSJ8 1104 aa22.81■■□□□ 1.24
LMNA-225ENST00000515824 ZNF214Q9UL59 606 aaPredicted RBP22.81■■□□□ 1.24
LMNA-225ENST00000515824 PLA2G6O60733 806 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 CYP21A2P08686 494 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 KCTD1Q719H9 257 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 DPP9Q86TI2 863 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 APBA2Q99767 749 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 TEX13BQ9BXU2 312 aa22.8■■□□□ 1.24
LMNA-225ENST00000515824 FCER1AP12319 257 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 ZKSCAN1P17029 563 aaPredicted RBP22.79■■□□□ 1.24
LMNA-225ENST00000515824 EN2P19622 333 aaPredicted RBP22.79■■□□□ 1.24
LMNA-225ENST00000515824 CCDC96Q2M329 555 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 ABRAQ8N0Z2 381 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 CPXCR1Q8N123 301 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 TRIB2Q92519 343 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 ZSCAN10Q96SZ4 725 aaPredicted RBP22.79■■□□□ 1.24
LMNA-225ENST00000515824 SLC38A10Q9HBR0 1119 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 SLC5A4Q9NY91 659 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 A0A0G2JMZ2 1700 aa22.79■■□□□ 1.24
LMNA-225ENST00000515824 KIAA0100Q14667 2235 aaKnown RBP22.78■■□□□ 1.24
LMNA-225ENST00000515824 ATP2A1O14983 1001 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 GJB1P08034 283 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 HOXC6P09630 235 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 ADORA2AP29274 412 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 ANKS1AQ92625 1134 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 UNC93B1Q9H1C4 597 aa22.78■■□□□ 1.24
LMNA-225ENST00000515824 RBM8AQ9Y5S9 174 aaKnown RBP22.78■■□□□ 1.24
LMNA-225ENST00000515824 CDC45O75419 566 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 SLC4A3P48751 1232 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 OAZ1P54368 228 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 SNRNP48Q6IEG0 339 aaKnown RBP22.77■■□□□ 1.24
LMNA-225ENST00000515824 UBAC1Q9BSL1 405 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 LSG1Q9H089 658 aaKnown RBP22.77■■□□□ 1.24
LMNA-225ENST00000515824 RAVER2Q9HCJ3 691 aaKnown RBP22.77■■□□□ 1.24
LMNA-225ENST00000515824 LAMA4Q16363 1823 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 RPTORQ8N122 1335 aa22.77■■□□□ 1.24
LMNA-225ENST00000515824 PARP14Q460N5 1801 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 BRCA2P51587 3418 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 PDHBP11177 359 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 KCTD2Q14681 263 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 CCL14Q16627 93 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 RALYLQ86SE5 291 aaKnown RBP22.76■■□□□ 1.23
LMNA-225ENST00000515824 MMP19Q99542 508 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 KAT14Q9H8E8 782 aa22.76■■□□□ 1.23
LMNA-225ENST00000515824 HMX1Q9NP08 348 aaPredicted RBP22.76■■□□□ 1.23
LMNA-225ENST00000515824 PLXNB2O15031 1838 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 E7EWF7 191 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 GJA8P48165 433 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 TRIM32Q13049 653 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 MFSD14CQ5VZR4 134 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 RASGRP2Q7LDG7 609 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 NCOA7Q8NI08 942 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 NPLOC4Q8TAT6 608 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 ANO2Q9NQ90 1003 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 PRR12Q9ULL5 1215 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 TNKSO95271 1327 aa22.75■■□□□ 1.23
LMNA-225ENST00000515824 COBLO75128 1261 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 CAPN2P17655 700 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 BTNL9Q6UXG8 535 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 ENAHQ8N8S7 591 aaPredicted RBP22.74■■□□□ 1.23
LMNA-225ENST00000515824 PNMA1Q8ND90 353 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 U2AF1L4Q8WU68 220 aaKnown RBP22.74■■□□□ 1.23
LMNA-225ENST00000515824 GPCPD1Q9NPB8 672 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 RIPK3Q9Y572 518 aa22.74■■□□□ 1.23
LMNA-225ENST00000515824 SGPL1O95470 568 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 SNHG28P0DPA3 235 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 PRKAR2AP13861 404 aaKnown RBP22.73■■□□□ 1.23
LMNA-225ENST00000515824 IFIT1BQ5T764 474 aaKnown RBP22.73■■□□□ 1.23
LMNA-225ENST00000515824 MAP3K21Q5TCX8 1036 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 TTBK2Q6IQ55 1244 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 CYB5R4Q7L1T6 521 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 DEFB118Q96PH6 123 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.73■■□□□ 1.23
LMNA-225ENST00000515824 PAK6Q9NQU5 681 aaPredicted RBP22.73■■□□□ 1.23
LMNA-225ENST00000515824 FBXO40Q9UH90 709 aa22.73■■□□□ 1.23
LMNA-225ENST00000515824 FRMPD2Q68DX3 1309 aaPredicted RBP22.73■■□□□ 1.23
LMNA-225ENST00000515824 ERICH2A1L162 156 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 SLC16A2P36021 539 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 CACNB2Q08289 660 aaPredicted RBP22.72■■□□□ 1.23
LMNA-225ENST00000515824 ZNF543Q08ER8 600 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 GPATCH4Q5T3I0 446 aaKnown RBP22.72■■□□□ 1.23
LMNA-225ENST00000515824 SYDE2Q5VT97 1194 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 OLFML2BQ68BL8 750 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 CHST13Q8NET6 341 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 FLRT1Q9NZU1 646 aa22.72■■□□□ 1.23
LMNA-225ENST00000515824 COL11A1P12107 1806 aaPredicted RBP22.72■■□□□ 1.23
LMNA-225ENST00000515824 TFRCP02786 760 aaKnown RBP22.71■■□□□ 1.23
LMNA-225ENST00000515824 CCDC174Q6PII3 467 aa22.71■■□□□ 1.23
LMNA-225ENST00000515824 DDX11Q96FC9 970 aa22.71■■□□□ 1.23
LMNA-225ENST00000515824 TAF6LQ9Y6J9 622 aa22.71■■□□□ 1.23
LMNA-225ENST00000515824 IFIT3O14879 490 aaKnown RBP22.7■■□□□ 1.22
LMNA-225ENST00000515824 SART3Q15020 963 aaKnown RBP22.7■■□□□ 1.22
LMNA-225ENST00000515824 NECTIN1Q15223 517 aa22.7■■□□□ 1.22
LMNA-225ENST00000515824 TKFCQ3LXA3 575 aa22.7■■□□□ 1.22
LMNA-225ENST00000515824 STOX1Q6ZVD7 989 aa22.7■■□□□ 1.22
LMNA-225ENST00000515824 AGBL1Q96MI9 1066 aa22.7■■□□□ 1.22
LMNA-225ENST00000515824 RANBP17Q9H2T7 1088 aaKnown RBP22.7■■□□□ 1.22
LMNA-225ENST00000515824 DIS3Q9Y2L1 958 aaKnown RBP22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms