RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 SIGLEC10Q96LC7 697 aa5.52□□□□□ -1.53
HERC4-215ENST00000515753 PLCD4Q9BRC7 762 aa5.52□□□□□ -1.53
HERC4-215ENST00000515753 CNTD2Q9H8S5 307 aa5.52□□□□□ -1.53
HERC4-215ENST00000515753 COPRSQ9NQ92 184 aa5.52□□□□□ -1.53
HERC4-215ENST00000515753 GGT7Q9UJ14 662 aa5.52□□□□□ -1.53
HERC4-215ENST00000515753 SUPT16HQ9Y5B9 1047 aaKnown RBP5.52□□□□□ -1.53
HERC4-215ENST00000515753 SLC22A31A6NKX4 558 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 RGS13O14921 159 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 SYPP08247 313 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 POLR2BP30876 1174 aaKnown RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 EIF4A3P38919 411 aaKnown RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 PCBP3P57721 371 aaKnown RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 NFIXQ14938 502 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 TMEM151BQ8IW70 566 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 DAGLBQ8NCG7 672 aa5.51□□□□□ -1.53
HERC4-215ENST00000515753 ENOX1Q8TC92 643 aaKnown RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 EPB41L4AQ9HCS5 686 aaPredicted RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 KIAA1522Q9P206 1035 aaPredicted RBP5.51□□□□□ -1.53
HERC4-215ENST00000515753 OTOL1A6NHN0 477 aaPredicted RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 UNCXA6NJT0 531 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 RAG1P15918 1043 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 KIR2DL1P43626 348 aaPredicted RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 KIR2DL2P43627 348 aaPredicted RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 AFF3P51826 1226 aaKnown RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 NBPF9Q3BBW0 867 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 BBS9Q3SYG4 887 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 FBXL19Q6PCT2 694 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 ZDHHC14Q8IZN3 488 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 FEZF2Q8TBJ5 459 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 DACT3Q96B18 629 aaPredicted RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 MRRFQ96E11 262 aaKnown RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 ZNF512BQ96KM6 892 aaPredicted RBP5.5□□□□□ -1.53
HERC4-215ENST00000515753 XYLT2Q9H1B5 865 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 CRTAC1Q9NQ79 661 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 ADAMTS1Q9UHI8 967 aa5.5□□□□□ -1.53
HERC4-215ENST00000515753 MEIS1O00470 390 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 N4BP3O15049 544 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 PRAMEF1O95521 474 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 SYN1P17600 705 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 RTP1P59025 263 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 CWF19L2Q2TBE0 894 aaKnown RBP5.49□□□□□ -1.53
HERC4-215ENST00000515753 NBPF12Q5TAG4 269 aaPredicted RBP5.49□□□□□ -1.53
HERC4-215ENST00000515753 METTL16Q86W50 562 aaKnown RBP5.49□□□□□ -1.53
HERC4-215ENST00000515753 ZNF655Q8N720 491 aaPredicted RBP5.49□□□□□ -1.53
HERC4-215ENST00000515753 LINC00116Q8NCU8 138 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 RNF34Q969K3 372 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 NT5C1AQ9BXI3 368 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 BRMS1Q9HCU9 246 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 JAG2Q9Y219 1238 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 PCDHB14Q9Y5E9 798 aa5.49□□□□□ -1.53
HERC4-215ENST00000515753 SASH1O94885 1247 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 ATE1O95260 518 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 PNLIPP16233 465 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 CDR1P51861 262 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 RNF4P78317 190 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 MLECQ14165 292 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 TMEFF1Q8IYR6 380 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 REXO1Q8N1G1 1221 aaKnown RBP5.48□□□□□ -1.53
HERC4-215ENST00000515753 SYT8Q8NBV8 401 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 ZNF296Q8WUU4 475 aaPredicted RBP5.48□□□□□ -1.53
HERC4-215ENST00000515753 PRDM14Q9GZV8 571 aa5.48□□□□□ -1.53
HERC4-215ENST00000515753 NCKAP1LP55160 1127 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 YBX1P67809 324 aaKnown RBP5.47□□□□□ -1.53
HERC4-215ENST00000515753 SKOR2Q2VWA4 1001 aaPredicted RBP5.47□□□□□ -1.53
HERC4-215ENST00000515753 HSF5Q4G112 596 aaPredicted RBP5.47□□□□□ -1.53
HERC4-215ENST00000515753 OVOS1Q6IE37 1185 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 CNKSR3Q6P9H4 555 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 USP48Q86UV5 1035 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 KIAA0825Q8IV33 1275 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 SLITRK4Q8IW52 837 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 MZB1Q8WU39 189 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.47□□□□□ -1.53
HERC4-215ENST00000515753 RTEL1Q9NZ71 1219 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 KLHL14Q9P2G3 628 aa5.47□□□□□ -1.53
HERC4-215ENST00000515753 DDX41Q9UJV9 622 aaKnown RBP5.47□□□□□ -1.53
HERC4-215ENST00000515753 GPR55Q9Y2T6 319 aaPredicted RBP5.47□□□□□ -1.53
HERC4-215ENST00000515753 FADS2P1A8MWK0 482 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 NUDT19A8MXV4 375 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 HRKO00198 91 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 SIGLEC6O43699 453 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 CRKP46108 304 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 RAB3GAP1Q15042 981 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 TMC6Q7Z403 805 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 FAM129CQ86XR2 697 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 SPON2Q9BUD6 331 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 EHMT1Q9H9B1 1298 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 GMIPQ9P107 970 aa5.46□□□□□ -1.54
HERC4-215ENST00000515753 MEIS3P2A8K0S8 358 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 IRS4O14654 1257 aaPredicted RBP5.45□□□□□ -1.54
HERC4-215ENST00000515753 MPOP05164 745 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 PRKCAP17252 672 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 ERVFRD-1P60508 538 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 HDLBPQ00341 1268 aaKnown RBP5.45□□□□□ -1.54
HERC4-215ENST00000515753 GALNT18Q6P9A2 607 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 PRRT2Q7Z6L0 340 aaPredicted RBP5.45□□□□□ -1.54
HERC4-215ENST00000515753 LDHDQ86WU2 507 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 IGDCC3Q8IVU1 814 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 ATG4CQ96DT6 458 aa5.45□□□□□ -1.54
HERC4-215ENST00000515753 FCRL2Q96LA5 508 aaPredicted RBP5.45□□□□□ -1.54
HERC4-215ENST00000515753 CDADC1Q9BWV3 514 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms