RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 COBLO75128 1261 aa17.52■□□□□ 0.4
HMGCLL1-209ENST00000515546 FCER1AP12319 257 aa17.52■□□□□ 0.4
HMGCLL1-209ENST00000515546 MFSD6Q6ZSS7 791 aa17.52■□□□□ 0.4
HMGCLL1-209ENST00000515546 ZNF213O14771 459 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 CEP290O15078 2479 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 TFRCP02786 760 aaKnown RBP17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 CHMLP26374 656 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 CCND3P30281 292 aaPredicted RBP17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 SLC1A4P43007 532 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 STAT2P52630 851 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 OAZ1P54368 228 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 RRP12Q5JTH9 1297 aaKnown RBP17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 MFSD14CQ5VZR4 134 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 RASGRP2Q7LDG7 609 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 DPP9Q86TI2 863 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 ANKLE1Q8NAG6 615 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 KIFC2Q96AC6 838 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 TOMM22Q9NS69 142 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 OGDHLQ9ULD0 1010 aa17.51■□□□□ 0.39
HMGCLL1-209ENST00000515546 TMEM232C9JQI7 657 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 ZBED4O75132 1171 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 FDX1P10109 184 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 TOP1P11387 765 aaKnown RBP17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 MCCP23508 829 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 MNX1P50219 401 aaPredicted RBP17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 LHX8Q68G74 356 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 SNRNP48Q6IEG0 339 aaKnown RBP17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 RCSD1Q6JBY9 416 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 FAM160B2Q86V87 743 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 DCAF4Q8WV16 495 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 ESR2Q92731 530 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 MMP19Q99542 508 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 TMEM47Q9BQJ4 181 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 SLC5A4Q9NY91 659 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 CTNNA3Q9UI47 895 aa17.5■□□□□ 0.39
HMGCLL1-209ENST00000515546 FRMPD3Q5JV73 1810 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 CYBAP13498 195 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 CYP2C19P33261 490 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 KCTD2Q14681 263 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 CENPQQ7L2Z9 268 aaPredicted RBP17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 MAML3Q96JK9 1138 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 RIPK3Q9Y572 518 aa17.49■□□□□ 0.39
HMGCLL1-209ENST00000515546 IMMTQ16891 758 aaKnown RBP17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 ZNF792Q3KQV3 632 aa17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 DIS3LQ8TF46 1054 aaKnown RBP17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 CHURC1Q8WUH1 139 aa17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 RUFY2Q8WXA3 655 aa17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 TTC14Q96N46 770 aa17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 DIS3Q9Y2L1 958 aaKnown RBP17.48■□□□□ 0.39
HMGCLL1-209ENST00000515546 ZNF536O15090 1300 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 SGSM2O43147 1006 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 NEFLP07196 543 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 PGK2P07205 417 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 KCTD1Q719H9 257 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 HTATIP2Q9BUP3 242 aa17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 RAVER2Q9HCJ3 691 aaKnown RBP17.47■□□□□ 0.39
HMGCLL1-209ENST00000515546 DNAJC25-GNG10A0A024R161 153 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 KDM4AO75164 1064 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 SNHG28P0DPA3 235 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 BTNL9Q6UXG8 535 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 DGKHQ86XP1 1220 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 CPXCR1Q8N123 301 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 CHST13Q8NET6 341 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 PAWRQ96IZ0 340 aaKnown RBP17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 FBXO40Q9UH90 709 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 DDX20Q9UHI6 824 aaKnown RBP17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 PRR12Q9ULL5 1215 aa17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 ISY1Q9ULR0 285 aaKnown RBP17.46■□□□□ 0.39
HMGCLL1-209ENST00000515546 MSCO60682 206 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 PDHBP11177 359 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 IKQ13123 557 aaPredicted RBP17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 CCDC96Q2M329 555 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 NECAB2Q7Z6G3 386 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 ANKS1AQ92625 1134 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 CNNM2Q9H8M5 875 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 NRBP1Q9UHY1 535 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 CTDP1Q9Y5B0 961 aaPredicted RBP17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 PLXNA1Q9UIW2 1896 aa17.45■□□□□ 0.38
HMGCLL1-209ENST00000515546 B4E1Z4 1266 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 COL6A1P12109 1028 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 PTH1RQ03431 593 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 CCDC178Q5BJE1 867 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 IQCA1Q86XH1 822 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 CHMP4CQ96CF2 233 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 TINF2Q9BSI4 451 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 KRT23Q9C075 422 aa17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 RANBP17Q9H2T7 1088 aaKnown RBP17.44■□□□□ 0.38
HMGCLL1-209ENST00000515546 ZNFX1Q9P2E3 1918 aaKnown RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 SEPT4O43236 478 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ZNF543Q08ER8 600 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 TKFCQ3LXA3 575 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 TTBK2Q6IQ55 1244 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ZNF467Q7Z7K2 595 aaPredicted RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 MSL3Q8N5Y2 521 aaKnown RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ENAHQ8N8S7 591 aaPredicted RBP17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 FGD4Q96M96 766 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 AGBL1Q96MI9 1066 aa17.43■□□□□ 0.38
HMGCLL1-209ENST00000515546 ZSCAN10Q96SZ4 725 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms