RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
TCOF1-215ENST00000515516 SENP6Q9GZR1 1112 aaPredicted RBP16.18■□□□□ 0.18
TCOF1-215ENST00000515516 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.18■□□□□ 0.18
TCOF1-215ENST00000515516 SUPT16HQ9Y5B9 1047 aaKnown RBP16.18■□□□□ 0.18
TCOF1-215ENST00000515516 TMEM232C9JQI7 657 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 DNM1LO00429 736 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 ATP2A1O14983 1001 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 FOXP2O15409 715 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 IGHA2P01877 340 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 FGAP02671 866 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 MYCNP04198 464 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-215ENST00000515516 COL6A1P12109 1028 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 STAT2P52630 851 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 OAZ1P54368 228 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 RRP12Q5JTH9 1297 aaKnown RBP16.17■□□□□ 0.18
TCOF1-215ENST00000515516 PRAMEF19Q5SWL8 479 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 PLEKHM2Q8IWE5 1019 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 GMCL1Q96IK5 515 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 SLC38A10Q9HBR0 1119 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 RAVER2Q9HCJ3 691 aaKnown RBP16.17■□□□□ 0.18
TCOF1-215ENST00000515516 INCENPQ9NQS7 918 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 FBXO40Q9UH90 709 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 NRBP1Q9UHY1 535 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 ZMYND8Q9ULU4 1186 aaPredicted RBP16.17■□□□□ 0.18
TCOF1-215ENST00000515516 PFASO15067 1338 aa16.17■□□□□ 0.18
TCOF1-215ENST00000515516 KBTBD13C9JR72 458 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 HIP1O00291 1037 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 ORC4O43929 436 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 HSPD1P10809 573 aaKnown RBP16.16■□□□□ 0.18
TCOF1-215ENST00000515516 SDSP20132 328 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 MCCP23508 829 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 FXR1P51114 621 aaKnown RBP eCLIP16.16■□□□□ 0.18
TCOF1-215ENST00000515516 ZNF792Q3KQV3 632 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 STAG1Q8WVM7 1258 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 CHMP4CQ96CF2 233 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 TINF2Q9BSI4 451 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 OSBPL3Q9H4L5 887 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 DIAPH3Q9NSV4 1193 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 PCDH10Q9P2E7 1040 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 CNPY2Q9Y2B0 182 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 CCDC171Q6TFL3 1326 aa16.16■□□□□ 0.18
TCOF1-215ENST00000515516 MYH8P13535 1937 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 SYN1P17600 705 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 GJC2Q5T442 439 aaPredicted RBP16.15■□□□□ 0.18
TCOF1-215ENST00000515516 ANO1Q5XXA6 986 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
TCOF1-215ENST00000515516 CHST13Q8NET6 341 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 MTMR7Q9Y216 660 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
TCOF1-215ENST00000515516 A0A1W2PPC1 479 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 NMT2O60551 498 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 RARBP10826 455 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 LRRC26Q2I0M4 334 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 RCSD1Q6JBY9 416 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 MFSD6Q6ZSS7 791 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 ZNF589Q86UQ0 364 aaPredicted RBP16.14■□□□□ 0.17
TCOF1-215ENST00000515516 RNF41Q9H4P4 317 aaPredicted RBP16.14■□□□□ 0.17
TCOF1-215ENST00000515516 IL17RBQ9NRM6 502 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 A0A0G2JMZ2 1700 aa16.14■□□□□ 0.17
TCOF1-215ENST00000515516 PLA2G6O60733 806 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 FGRP09769 529 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 PCP11498 1178 aaKnown RBP16.13■□□□□ 0.17
TCOF1-215ENST00000515516 ATN1P54259 1190 aaPredicted RBP16.13■□□□□ 0.17
TCOF1-215ENST00000515516 HAND2P61296 217 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 CCDC96Q2M329 555 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 CWC27Q6UX04 472 aaKnown RBP16.13■□□□□ 0.17
TCOF1-215ENST00000515516 KCTD1Q719H9 257 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 PRO3102Q9H379 93 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 HOMER2Q9NSB8 354 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 PRKAG2Q9UGJ0 569 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 ZMYM6O95789 1325 aa16.13■□□□□ 0.17
TCOF1-215ENST00000515516 ZNF236Q9UL36 1845 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 ZNF213O14771 459 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 TOP1P11387 765 aaKnown RBP16.12■□□□□ 0.17
TCOF1-215ENST00000515516 AKR1A1P14550 325 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 TKFCQ3LXA3 575 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 AKNAD1Q5T1N1 836 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 RNF180Q86T96 592 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 DCAF4Q8WV16 495 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 ACAD9Q9H845 621 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 XPNPEP3Q9NQH7 507 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 TCP11L1Q9NUJ3 509 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 SYNGAP1Q96PV0 1343 aa16.12■□□□□ 0.17
TCOF1-215ENST00000515516 BMP8BP34820 402 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 LRRC41Q15345 812 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 CCDC174Q6PII3 467 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 ZNF467Q7Z7K2 595 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-215ENST00000515516 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-215ENST00000515516 ZHX1Q9UKY1 873 aaPredicted RBP16.11■□□□□ 0.17
TCOF1-215ENST00000515516 FAM184BQ9ULE4 1060 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 TACC3Q9Y6A5 838 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 RLFQ13129 1914 aa16.11■□□□□ 0.17
TCOF1-215ENST00000515516 GREB1LQ9C091 1923 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 DNAJC25-GNG10A0A024R161 153 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 POTEB2H3BUK9 544 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 ZNF865P0CJ78 1059 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 ALAS1P13196 640 aa16.1■□□□□ 0.17
TCOF1-215ENST00000515516 TAL1P17542 331 aaPredicted RBP16.1■□□□□ 0.17
TCOF1-215ENST00000515516 ADCYAP1R1P41586 468 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms