RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 SMARCA1P28370 1054 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 SLC39A14Q15043 492 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 PTPAQ15257 358 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 PPP4R3BQ5MIZ7 849 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 GPATCH4Q5T3I0 446 aaKnown RBP10.52□□□□□ -0.73
CPNE4-213ENST00000515418 PIK3AP1Q6ZUJ8 805 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 CCAR1Q8IX12 1150 aaKnown RBP10.52□□□□□ -0.73
CPNE4-213ENST00000515418 BLIDQ8IZY5 108 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 BICD2Q8TD16 824 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 TNFRSF25Q93038 417 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 SEC63Q9UGP8 760 aaKnown RBP10.52□□□□□ -0.73
CPNE4-213ENST00000515418 MRVI1Q9Y6F6 885 aa10.52□□□□□ -0.73
CPNE4-213ENST00000515418 SMCO2A6NFE2 343 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 TMEM232C9JQI7 657 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 NR1I2O75469 434 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 INPP5BP32019 993 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 NAPAP54920 295 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 PRKG1Q13976 671 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 CAMK4Q16566 473 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 GMCL1P1Q8NEA9 526 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 DCAF4Q8WV16 495 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 CLIC6Q96NY7 704 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 GOLPH3LQ9H4A5 285 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 SH3GLB2Q9NR46 395 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 DACT1Q9NYF0 836 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 PCDHA4Q9UN74 947 aa10.51□□□□□ -0.73
CPNE4-213ENST00000515418 YEATS4O95619 227 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 IKQ13123 557 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ZNF174Q15697 407 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 RILPL1Q5EBL4 403 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ZKSCAN4Q969J2 545 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ARHGEF10LQ9HCE6 1279 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 BRMS1Q9HCU9 246 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 PCDHA6Q9UN73 950 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 TMX2Q9Y320 296 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 PCDHA8Q9Y5H6 950 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 PNMA6FA0A0J9YX94 578 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 A0A1B0GVL5 298 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ASNSP08243 561 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 BMP3P12645 472 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 CALML3P27482 149 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 LMOD1P29536 600 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 DGKZQ13574 1117 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 AXDND1Q5T1B0 1012 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ADALQ6DHV7 355 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 SAMD1Q6SPF0 538 aaPredicted RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 APOBEC3FQ8IUX4 373 aaKnown RBP10.5□□□□□ -0.73
CPNE4-213ENST00000515418 KCNG4Q8TDN1 519 aa10.5□□□□□ -0.73
CPNE4-213ENST00000515418 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.49□□□□□ -0.73
CPNE4-213ENST00000515418 M0R2N6 131 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 TAL1P17542 331 aaPredicted RBP10.49□□□□□ -0.73
CPNE4-213ENST00000515418 GRIN1Q05586 938 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 SPECC1Q5M775 1068 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 FAM83BQ5T0W9 1011 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 CCDC183Q5T5S1 534 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 DPY19L2Q6NUT2 758 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 FSIP1Q8NA03 581 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 GMCL1Q96IK5 515 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 ZNF341Q9BYN7 854 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 ZMYND12Q9H0C1 365 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 ADARB2Q9NS39 739 aaKnown RBP10.49□□□□□ -0.73
CPNE4-213ENST00000515418 BIN2Q9UBW5 565 aaPredicted RBP10.49□□□□□ -0.73
CPNE4-213ENST00000515418 ATAD5Q96QE3 1844 aa10.49□□□□□ -0.73
CPNE4-213ENST00000515418 TRIM75PA6NK02 468 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 ZBTB5O15062 677 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 CTNND1O60716 968 aaKnown RBP10.48□□□□□ -0.73
CPNE4-213ENST00000515418 SNW1Q13573 536 aaKnown RBP10.48□□□□□ -0.73
CPNE4-213ENST00000515418 QRICH1Q2TAL8 776 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 CCDC148Q8NFR7 591 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 SYAP1Q96A49 352 aaPredicted RBP10.48□□□□□ -0.73
CPNE4-213ENST00000515418 MTMR8Q96EF0 704 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 TMEM260Q9NX78 707 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 ADM5C9JUS6 153 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 NDUFA8P51970 172 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 ZNF445P59923 1031 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 CDC37Q16543 378 aaPredicted RBP10.48□□□□□ -0.73
CPNE4-213ENST00000515418 INF2Q27J81 1249 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 TTC38Q5R3I4 469 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 JAKMIP3Q5VZ66 844 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 WRNIP1Q96S55 665 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 GOPCQ9HD26 462 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 C6orf50Q9HD87 102 aa10.48□□□□□ -0.73
CPNE4-213ENST00000515418 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.48□□□□□ -0.73
CPNE4-213ENST00000515418 CCDC194A0A1B0GVG4 234 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 FSD2A1L4K1 749 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 GOLGA6L3A6NEY3 463 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 PPP6R2O75170 966 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 MCM7P33993 719 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 SYDE2Q5VT97 1194 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 SHC4Q6S5L8 630 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 CKAP2LQ8IYA6 745 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 ENGASEQ8NFI3 743 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 CCDC12Q8WUD4 166 aaPredicted RBP10.47□□□□□ -0.73
CPNE4-213ENST00000515418 VCPKMTQ9H867 229 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 FBXO28Q9NVF7 368 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 PRR12Q9ULL5 1215 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 PCDHA1Q9Y5I3 950 aa10.47□□□□□ -0.73
CPNE4-213ENST00000515418 A0A1W2PQ27 194 aa10.46□□□□□ -0.73
CPNE4-213ENST00000515418 A0A1W2PQ64 194 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms