RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 FAM83AQ86UY5 434 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 OGFOD1Q8N543 542 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 KRI1Q8N9T8 703 aaKnown RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 CCDC12Q8WUD4 166 aaPredicted RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 PDLIM2Q96JY6 352 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 PRMT6Q96LA8 375 aaPredicted RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 GOLPH3LQ9H4A5 285 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 BARHL2Q9NY43 387 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 VPS54Q9P1Q0 977 aa11.71□□□□□ -0.53
SNF8-214ENST00000515174 NOL7Q9UMY1 257 aaKnown RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 SRPRBQ9Y5M8 271 aaKnown RBP11.71□□□□□ -0.53
SNF8-214ENST00000515174 PAPPA2Q9BXP8 1791 aa11.71□□□□□ -0.54
SNF8-214ENST00000515174 DDTLA6NHG4 134 aaPredicted RBP11.7□□□□□ -0.54
SNF8-214ENST00000515174 TRIM75PA6NK02 468 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 PDHBP11177 359 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 RPS12P25398 132 aaKnown RBP11.7□□□□□ -0.54
SNF8-214ENST00000515174 GMPSP49915 693 aaPredicted RBP11.7□□□□□ -0.54
SNF8-214ENST00000515174 RBM5P52756 815 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNF8-214ENST00000515174 NLRP5P59047 1200 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 MAP3K10Q02779 954 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 FMR1Q06787 632 aaKnown RBP eCLIP11.7□□□□□ -0.54
SNF8-214ENST00000515174 NR5A1Q13285 461 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 TNIP1Q15025 636 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 SLC35G1Q2M3R5 365 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 TMEM179Q6ZVK1 233 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 TEX2Q8IWB9 1127 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 ZFPM1Q8IX07 1006 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 OXER1Q8TDS5 423 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 FAM151AQ8WW52 585 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 FERMT2Q96AC1 680 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 PANK2Q9BZ23 570 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 ZMYND12Q9H0C1 365 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 DNAJC18Q9H819 358 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 CABP5Q9NP86 173 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 TMOD2Q9NZR1 351 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 PCDHA4Q9UN74 947 aa11.7□□□□□ -0.54
SNF8-214ENST00000515174 ZNF202O95125 648 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 NDUFA8P51970 172 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 TYRO3Q06418 890 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 ZNF543Q08ER8 600 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 ORC2Q13416 577 aaPredicted RBP11.69□□□□□ -0.54
SNF8-214ENST00000515174 DLGAP5Q15398 846 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 SPDYE2Q495Y8 402 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 CERKLQ49MI3 558 aaPredicted RBP11.69□□□□□ -0.54
SNF8-214ENST00000515174 HS1BP3Q53T59 392 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 BLIDQ8IZY5 108 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 MTMR8Q96EF0 704 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
SNF8-214ENST00000515174 TDRD3Q9H7E2 651 aaKnown RBP11.69□□□□□ -0.54
SNF8-214ENST00000515174 FBXO2Q9UK22 296 aaPredicted RBP11.69□□□□□ -0.54
SNF8-214ENST00000515174 DOCK1Q14185 1865 aa11.69□□□□□ -0.54
SNF8-214ENST00000515174 STXBP3O00186 592 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 TRAF5O00463 557 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 AOC2O75106 756 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 GNA11P29992 359 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 EPS15P42566 896 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 RGS19P49795 217 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 CACNB3P54284 484 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 ZNF280AP59817 542 aaPredicted RBP11.68□□□□□ -0.54
SNF8-214ENST00000515174 ARL6IP4Q66PJ3 421 aaKnown RBP11.68□□□□□ -0.54
SNF8-214ENST00000515174 PPP1R18Q6NYC8 613 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 SHC4Q6S5L8 630 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 FAM200AQ8TCP9 573 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 DCAF4Q8WV16 495 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 DPF2Q92785 391 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 ZNF70Q9UC06 446 aaPredicted RBP11.68□□□□□ -0.54
SNF8-214ENST00000515174 CLIP2Q9UDT6 1046 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 PCDHB6Q9Y5E3 794 aa11.68□□□□□ -0.54
SNF8-214ENST00000515174 BAZ2BQ9UIF8 2168 aaKnown RBP11.67□□□□□ -0.54
SNF8-214ENST00000515174 A0A1B0GVL5 298 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 USP17L5A8MUK1 530 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 EGFRP00533 1210 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 PFKFB1P16118 471 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 MARCKSP29966 332 aaPredicted RBP11.67□□□□□ -0.54
SNF8-214ENST00000515174 MAP2K2P36507 400 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 SYKP43405 635 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 ATP2C1P98194 919 aaPredicted RBP11.67□□□□□ -0.54
SNF8-214ENST00000515174 CAMK4Q16566 473 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 KANK3Q6NY19 840 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 USP17L2Q6R6M4 530 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 MICALL2Q8IY33 904 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 SDF4Q9BRK5 362 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 MCOLN1Q9GZU1 580 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 GLT8D2Q9H1C3 349 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 GINM1Q9NU53 330 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 FAM13BQ9NYF5 915 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 KIAA1468Q9P260 1216 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 USP25Q9UHP3 1055 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 MRVI1Q9Y6F6 885 aa11.67□□□□□ -0.54
SNF8-214ENST00000515174 PNMA6FA0A0J9YX94 578 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 hCG_1642624A0A1W2PR95 340 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 CLRN2A0PK11 232 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 LAD1O00515 517 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 CA12O43570 354 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 CELF2O95319 508 aaKnown RBP11.66□□□□□ -0.54
SNF8-214ENST00000515174 TCP10Q12799 353 aa11.66□□□□□ -0.54
SNF8-214ENST00000515174 DGKZQ13574 1117 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms