RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 NECAB2Q7Z6G3 386 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 CHMP4CQ96CF2 233 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 GMCL1Q96IK5 515 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 OGDHLQ9ULD0 1010 aa28.96■■■□□ 2.23
SNF8-213ENST00000514929 CNGA1P29973 690 aa28.95■■■□□ 2.22
SNF8-213ENST00000514929 SLC1A4P43007 532 aa28.95■■■□□ 2.22
SNF8-213ENST00000514929 SLC4A3P48751 1232 aa28.95■■■□□ 2.22
SNF8-213ENST00000514929 MFSD6Q6ZSS7 791 aa28.95■■■□□ 2.22
SNF8-213ENST00000514929 CPXCR1Q8N123 301 aa28.95■■■□□ 2.22
SNF8-213ENST00000514929 DIS3LQ8TF46 1054 aaKnown RBP28.95■■■□□ 2.22
SNF8-213ENST00000514929 TMEM232C9JQI7 657 aa28.94■■■□□ 2.22
SNF8-213ENST00000514929 PCP11498 1178 aaKnown RBP28.94■■■□□ 2.22
SNF8-213ENST00000514929 MCCP23508 829 aa28.94■■■□□ 2.22
SNF8-213ENST00000514929 IKQ13123 557 aaPredicted RBP28.94■■■□□ 2.22
SNF8-213ENST00000514929 AKNAD1Q5T1N1 836 aa28.94■■■□□ 2.22
SNF8-213ENST00000514929 RNF41Q9H4P4 317 aaPredicted RBP28.94■■■□□ 2.22
SNF8-213ENST00000514929 ZNF213O14771 459 aa28.93■■■□□ 2.22
SNF8-213ENST00000514929 GSPT1P15170 499 aaKnown RBP28.93■■■□□ 2.22
SNF8-213ENST00000514929 STAT2P52630 851 aa28.93■■■□□ 2.22
SNF8-213ENST00000514929 CHURC1Q8WUH1 139 aa28.93■■■□□ 2.22
SNF8-213ENST00000514929 NBPF3Q9H094 633 aa28.93■■■□□ 2.22
SNF8-213ENST00000514929 SLC38A10Q9HBR0 1119 aa28.93■■■□□ 2.22
SNF8-213ENST00000514929 ATP2A1O14983 1001 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 LHX8Q68G74 356 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 FAM160B2Q86V87 743 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 TBC1D10CQ8IV04 446 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 STAG1Q8WVM7 1258 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 MAML3Q96JK9 1138 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 RAVER2Q9HCJ3 691 aaKnown RBP28.92■■■□□ 2.22
SNF8-213ENST00000514929 MTMR7Q9Y216 660 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 RIPK3Q9Y572 518 aa28.92■■■□□ 2.22
SNF8-213ENST00000514929 H0YGN5 161 aa28.91■■■□□ 2.22
SNF8-213ENST00000514929 IGHA2P01877 340 aa28.91■■■□□ 2.22
SNF8-213ENST00000514929 PGK2P07205 417 aa28.91■■■□□ 2.22
SNF8-213ENST00000514929 FDX1P10109 184 aa28.91■■■□□ 2.22
SNF8-213ENST00000514929 NOVP48745 357 aa28.91■■■□□ 2.22
SNF8-213ENST00000514929 DDX20Q9UHI6 824 aaKnown RBP28.91■■■□□ 2.22
SNF8-213ENST00000514929 MSCO60682 206 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 CYBAP13498 195 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 RCSD1Q6JBY9 416 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 KCTD1Q719H9 257 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 TRPV1Q8NER1 839 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 DSCC1Q9BVC3 393 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 TCP11L1Q9NUJ3 509 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 NR2E3Q9Y5X4 410 aa28.9■■■□□ 2.22
SNF8-213ENST00000514929 ZNFX1Q9P2E3 1918 aaKnown RBP28.9■■■□□ 2.22
SNF8-213ENST00000514929 TOP1P11387 765 aaKnown RBP28.89■■■□□ 2.22
SNF8-213ENST00000514929 MNX1P50219 401 aaPredicted RBP28.89■■■□□ 2.22
SNF8-213ENST00000514929 OAZ1P54368 228 aa28.89■■■□□ 2.22
SNF8-213ENST00000514929 C11orf49Q9H6J7 331 aa28.89■■■□□ 2.22
SNF8-213ENST00000514929 EVI5O60447 810 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 CCDC96Q2M329 555 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 ESR2Q92731 530 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 DDX11Q96FC9 970 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 TMEM47Q9BQJ4 181 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 CTNNA3Q9UI47 895 aa28.88■■■□□ 2.21
SNF8-213ENST00000514929 DIS3Q9Y2L1 958 aaKnown RBP28.88■■■□□ 2.21
SNF8-213ENST00000514929 PLA2G6O60733 806 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 IMMTQ16891 758 aaKnown RBP28.87■■■□□ 2.21
SNF8-213ENST00000514929 ZNF792Q3KQV3 632 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 RASGRP2Q7LDG7 609 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 DCAF4Q8WV16 495 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 FBXO40Q9UH90 709 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 NEDD4P46934 1319 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 LAMA4Q16363 1823 aa28.87■■■□□ 2.21
SNF8-213ENST00000514929 PRAMEF19Q5SWL8 479 aa28.86■■■□□ 2.21
SNF8-213ENST00000514929 FRMPD3Q5JV73 1810 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 CHST13Q8NET6 341 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 RUFY2Q8WXA3 655 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 TTC14Q96N46 770 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 TINF2Q9BSI4 451 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 PLXNA1Q9UIW2 1896 aa28.85■■■□□ 2.21
SNF8-213ENST00000514929 SEPT4O43236 478 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 NT5C2P49902 561 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 ANKRD35Q8N283 1001 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 IL25Q9H293 177 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 HOMER2Q9NSB8 354 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 PRR12Q9ULL5 1215 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 RAD50Q92878 1312 aa28.84■■■□□ 2.21
SNF8-213ENST00000514929 ZKSCAN3Q9BRR0 538 aa28.83■■■□□ 2.21
SNF8-213ENST00000514929 KDM4AO75164 1064 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 CHMLP26374 656 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 ANO1Q5XXA6 986 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 CCDC174Q6PII3 467 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 AGBL1Q96MI9 1066 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 NRBP1Q9UHY1 535 aa28.82■■■□□ 2.2
SNF8-213ENST00000514929 PFASO15067 1338 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 ZNF536O15090 1300 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 DNAJC25-GNG10A0A024R161 153 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 COL6A1P12109 1028 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 SNAP25P60880 206 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.81■■■□□ 2.2
SNF8-213ENST00000514929 IQCA1Q86XH1 822 aa28.81■■■□□ 2.2
SNF8-213ENST00000514929 FRMPD2Q68DX3 1309 aaPredicted RBP28.8■■■□□ 2.2
SNF8-213ENST00000514929 B4E1Z4 1266 aa28.8■■■□□ 2.2
SNF8-213ENST00000514929 SLC16A2P36021 539 aa28.8■■■□□ 2.2
SNF8-213ENST00000514929 CCDC178Q5BJE1 867 aa28.8■■■□□ 2.2
SNF8-213ENST00000514929 TTBK2Q6IQ55 1244 aa28.8■■■□□ 2.2
SNF8-213ENST00000514929 ACAD9Q9H845 621 aa28.8■■■□□ 2.2
SNF8-213ENST00000514929 GPCPD1Q9NPB8 672 aa28.8■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms