RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 LBX2Q6XYB7 198 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 SPICE1Q8N0Z3 855 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 STAG2Q8N3U4 1231 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 BRI3BPQ8WY22 251 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 MTMR8Q96EF0 704 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 INTS4Q96HW7 963 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 LARP6Q9BRS8 491 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 RPAP3Q9H6T3 665 aaPredicted RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 RIOX1Q9H6W3 641 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 ADAMTS5Q9UNA0 930 aa13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 RBM19Q9Y4C8 960 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 BAZ2BQ9UIF8 2168 aaKnown RBP13.93□□□□□ -0.18
PDLIM5-220ENST00000514830 CCL15-CCL14A0A0B4J2E2 113 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 RXRAP19793 462 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 ADD1P35611 737 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 SREBF2Q12772 1141 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 BECN1Q14457 450 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 CCL15Q16663 113 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 CCDC96Q2M329 555 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 CPLX2Q6PUV4 134 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 RASGRP2Q7LDG7 609 aa13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 PRPF38AQ8NAV1 312 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 NUP88Q99567 741 aaPredicted RBP13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 RBM27Q9P2N5 1060 aaKnown RBP13.92□□□□□ -0.18
PDLIM5-220ENST00000514830 STK36Q9NRP7 1315 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 TMEM232C9JQI7 657 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 ANP32AP39687 249 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 CCT2P78371 535 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 STK3Q13188 491 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 DGKZQ13574 1117 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 COG2Q14746 738 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 SLC35G1Q2M3R5 365 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 TREML2Q5T2D2 321 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 SYDE2Q5VT97 1194 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 CYP4F22Q6NT55 531 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 GADL1Q6ZQY3 521 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 NOL8Q76FK4 1167 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 NBPF11Q86T75 865 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 FAM177A1Q8N128 213 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 SRBD1Q8N5C6 995 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 SMARCC2Q8TAQ2 1214 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 GTF3C2Q8WUA4 911 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 SLF1Q9BQI6 1058 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 RNF26Q9BY78 433 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 NCOA5Q9HCD5 579 aaKnown RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 HOXC10Q9NYD6 342 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 PCDH10Q9P2E7 1040 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 PNMA3Q9UL41 463 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 NAP1L2Q9ULW6 460 aaPredicted RBP13.91□□□□□ -0.18
PDLIM5-220ENST00000514830 FRMPD2Q68DX3 1309 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 CNTNAP5Q8WYK1 1306 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 BTBD19C9JJ37 291 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 CPLX1O14810 134 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 PRPF3O43395 683 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 CYTH3O43739 400 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 RAD21O60216 631 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 PLEKHA8P1O95397 391 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 CTDNEP1O95476 244 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 GOLGA8HP0CJ92 632 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 DSG3P32926 999 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 OTUD7BQ6GQQ9 843 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 TTBK2Q6IQ55 1244 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 RAB11FIP4Q86YS3 637 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 CCDC144CPQ8IYA2 1237 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 NECAB1Q8N987 351 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 RGS22Q8NE09 1264 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 NSUN7Q8NE18 718 aaKnown RBP13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 PTPN18Q99952 460 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 TANGO6Q9C0B7 1094 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 PNMA2Q9UL42 364 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 PRR12Q9ULL5 1215 aa13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.9□□□□□ -0.18
PDLIM5-220ENST00000514830 RBBP6Q7Z6E9 1792 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 ATP2A1O14983 1001 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 FLOT1O75955 427 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 FMNL1O95466 1100 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 OSBPP22059 807 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 RGS19P49795 217 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 OAZ1P54368 228 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 HMGN5P82970 282 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 KIF23Q02241 960 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 IFNL1Q8IU54 200 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 CCDC83Q8IWF9 413 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 ADGRF4Q8IZF3 695 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 MB21D1Q8N884 522 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 ASCC2Q9H1I8 757 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 RANBP17Q9H2T7 1088 aaKnown RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 JMJD4Q9H9V9 463 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 SLC38A10Q9HBR0 1119 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 MTMR7Q9Y216 660 aa13.89□□□□□ -0.19
PDLIM5-220ENST00000514830 SPDYE16A6NNV3 312 aaPredicted RBP13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 hCG_1984214I3L0E3 225 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 PDHXO00330 501 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 VWA5AO00534 786 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 ALDH1A1P00352 501 aa13.88□□□□□ -0.19
PDLIM5-220ENST00000514830 IRX3P78415 501 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms