RNA–Protein interactions for RNA: ENST00000514552.5

PDE4D-222, Transcript of phosphodiesterase 4D, humanhuman

TSL 3

Gene PDE4D, Length 494 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-222ENST00000514552 QSER1Q2KHR3 1735 aa9.44□□□□□ -0.9
PDE4D-222ENST00000514552 GOLGB1Q14789 3259 aaKnown RBP9.43□□□□□ -0.9
PDE4D-222ENST00000514552 BTAF1O14981 1849 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 MYOM1P52179 1685 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 ANKRD36BQ8N2N9 1353 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 MAP3K5Q99683 1374 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 F6X3S4 739 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 PF4P02776 101 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 USP11P51784 963 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 ERVK-24P63145 666 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 SLC15A2Q16348 729 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 PTF1AQ7RTS3 328 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 FAM20CQ8IXL6 584 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 TESK2Q96S53 571 aa9.43□□□□□ -0.9
PDE4D-222ENST00000514552 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.42□□□□□ -0.9
PDE4D-222ENST00000514552 MINDY4BA8MYZ0 360 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 H2AFB1P0C5Y9 115 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 H2AFB2P0C5Z0 115 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 BMP3P12645 472 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 METTL16Q86W50 562 aaKnown RBP9.42□□□□□ -0.9
PDE4D-222ENST00000514552 IP6K1Q92551 441 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 FANCD2OSQ96PS1 177 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 YIPF2Q9BWQ6 316 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 MTFR1LQ9H019 292 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 SLC12A5Q9H2X9 1139 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 KCNQ5Q9NR82 932 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 DISC1Q9NRI5 854 aa9.42□□□□□ -0.9
PDE4D-222ENST00000514552 KIF24Q5T7B8 1368 aa9.41□□□□□ -0.9
PDE4D-222ENST00000514552 ASPAP45381 313 aa9.41□□□□□ -0.9
PDE4D-222ENST00000514552 HDLBPQ00341 1268 aaKnown RBP9.41□□□□□ -0.9
PDE4D-222ENST00000514552 PRR23CQ6ZRP0 262 aa9.41□□□□□ -0.9
PDE4D-222ENST00000514552 FAM105AQ9NUU6 356 aa9.41□□□□□ -0.9
PDE4D-222ENST00000514552 SNCAIPQ9Y6H5 919 aa9.41□□□□□ -0.9
PDE4D-222ENST00000514552 COL24A1Q17RW2 1714 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 CGNL1Q0VF96 1302 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 YY1P25490 414 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 MAP4P27816 1152 aaKnown RBP9.4□□□□□ -0.9
PDE4D-222ENST00000514552 EIF4A3P38919 411 aaKnown RBP9.4□□□□□ -0.9
PDE4D-222ENST00000514552 RSPO4Q2I0M5 234 aaPredicted RBP9.4□□□□□ -0.9
PDE4D-222ENST00000514552 SGO2Q562F6 1265 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 NKAPLQ5M9Q1 402 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 SNAP47Q5SQN1 464 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 HDXQ7Z353 690 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 USP48Q86UV5 1035 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 ELMO3Q96BJ8 720 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 COG3Q96JB2 828 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 RAXQ9Y2V3 346 aa9.4□□□□□ -0.9
PDE4D-222ENST00000514552 SMG6Q86US8 1419 aaKnown RBP9.39□□□□□ -0.91
PDE4D-222ENST00000514552 GARTP22102 1010 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 RING1Q06587 406 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 INPP5AQ14642 412 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 CDPF1Q6NVV7 123 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 LRFN4Q6PJG9 635 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-222ENST00000514552 CLEC10AQ8IUN9 316 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 GOLM1Q8NBJ4 401 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 RNF214Q8ND24 703 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 GATAD2BQ8WXI9 593 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 EZH1Q92800 747 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-222ENST00000514552 JARID2Q92833 1246 aaPredicted RBP9.39□□□□□ -0.91
PDE4D-222ENST00000514552 PLPPR2Q96GM1 343 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 ACSS3Q9H6R3 686 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 PIDD1Q9HB75 910 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 DOT1LQ8TEK3 1739 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 SHANK3Q9BYB0 1731 aa9.39□□□□□ -0.91
PDE4D-222ENST00000514552 MAP3K19Q56UN5 1328 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 ST20-MTHFSA0A0A6YYL1 179 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 FAM221AA4D161 298 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 DCDC2CA8MYV0 355 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 CILPO75339 1184 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 ZBTB7AO95365 584 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 TCF3P15923 654 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 HMGB2P26583 209 aaKnown RBP9.38□□□□□ -0.91
PDE4D-222ENST00000514552 HOXC9P31274 260 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 RPL6Q02878 288 aaKnown RBP9.38□□□□□ -0.91
PDE4D-222ENST00000514552 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 BNC2Q6ZN30 1099 aaPredicted RBP9.38□□□□□ -0.91
PDE4D-222ENST00000514552 BEND4Q6ZU67 534 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 CYFIP1Q7L576 1253 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 NT5DC4Q86YG4 428 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 FAM83CQ9BQN1 747 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 KCNF1Q9H3M0 494 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 STOML1Q9UBI4 398 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 ADAMTS1Q9UHI8 967 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
PDE4D-222ENST00000514552 SUPT16HQ9Y5B9 1047 aaKnown RBP9.38□□□□□ -0.91
PDE4D-222ENST00000514552 TACC3Q9Y6A5 838 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 LY75O60449 1722 aa9.38□□□□□ -0.91
PDE4D-222ENST00000514552 USP47Q96K76 1375 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 MEGF6O75095 1541 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 GFRA2O00451 464 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 FANCGO15287 622 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 GREM1O60565 184 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 F13A1P00488 732 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 RAB6AP20340 208 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 TMF1P82094 1093 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 TTLL4Q14679 1199 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 ZNF394Q53GI3 561 aa9.37□□□□□ -0.91
PDE4D-222ENST00000514552 WIPI1Q5MNZ9 446 aaPredicted RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms