RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 GMCL1Q96IK5 515 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 SLC38A10Q9HBR0 1119 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 IL17RBQ9NRM6 502 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 FEM1BQ9UK73 627 aa12.41□□□□□ -0.42
HMGXB3-205ENST00000514469 FGAP02671 866 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 PGK2P07205 417 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 HSPD1P10809 573 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 BMP3P12645 472 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 CNGA1P29973 690 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 NOVP48745 357 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 FXR1P51114 621 aaKnown RBP eCLIP12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 KCTD2Q14681 263 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 ZNF792Q3KQV3 632 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 SLFN13Q68D06 897 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 C7orf61Q8IZ16 206 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 RILPL2Q969X0 211 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 KIFC2Q96AC6 838 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 INCENPQ9NQS7 918 aa12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 DIS3Q9Y2L1 958 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 SUPT16HQ9Y5B9 1047 aaKnown RBP12.4□□□□□ -0.42
HMGXB3-205ENST00000514469 SEPT4O43236 478 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 NMT2O60551 498 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 ZBED4O75132 1171 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 SDSP20132 328 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 OAZ1P54368 228 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 LAMA4Q16363 1823 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 DNAH12Q6ZR08 3092 aa12.39□□□□□ -0.43
HMGXB3-205ENST00000514469 TMEM232C9JQI7 657 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 DNM1LO00429 736 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 PLA2G6O60733 806 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 FDX1P10109 184 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 SLC1A4P43007 532 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 STAT2P52630 851 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 MFAP1P55081 439 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 LRRC26Q2I0M4 334 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 FAM160B2Q86V87 743 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 TINF2Q9BSI4 451 aa12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 RAVER2Q9HCJ3 691 aaKnown RBP12.38□□□□□ -0.43
HMGXB3-205ENST00000514469 DNAJC25-GNG10A0A024R161 153 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 PRAMEF19Q5SWL8 479 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 RASGRP2Q7LDG7 609 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 TBC1D10CQ8IV04 446 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 CPXCR1Q8N123 301 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 MSL3Q8N5Y2 521 aaKnown RBP12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 STAG1Q8WVM7 1258 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 TCP11L1Q9NUJ3 509 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 FBXO40Q9UH90 709 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 PLXNA1Q9UIW2 1896 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 ZNF536O15090 1300 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 SYNGAP1Q96PV0 1343 aa12.37□□□□□ -0.43
HMGXB3-205ENST00000514469 A0A1W2PPC1 479 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 HIP1O00291 1037 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 PCP11498 1178 aaKnown RBP12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 MCCP23508 829 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 PDE4AP27815 886 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 HAND2P61296 217 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 MAMDC4Q6UXC1 1216 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 GDF15Q99988 308 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 TOMM22Q9NS69 142 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 DIAPH3Q9NSV4 1193 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 CEP290O15078 2479 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 NEDD4P46934 1319 aa12.36□□□□□ -0.43
HMGXB3-205ENST00000514469 KBTBD13C9JR72 458 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 ZNF865P0CJ78 1059 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 SYN1P17600 705 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 IKQ13123 557 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 RRP12Q5JTH9 1297 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 AKNAD1Q5T1N1 836 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 GJC2Q5T442 439 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 ANO1Q5XXA6 986 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 RCSD1Q6JBY9 416 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 CWC27Q6UX04 472 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 KCTD1Q719H9 257 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 ZNF467Q7Z7K2 595 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 ARRDC4Q8NCT1 418 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 DCAF4Q8WV16 495 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 FGD4Q96M96 766 aa12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 SENP6Q9GZR1 1112 aaPredicted RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 ISY1Q9ULR0 285 aaKnown RBP12.35□□□□□ -0.43
HMGXB3-205ENST00000514469 SZT2Q5T011 3432 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 LRRC37A2A6NM11 1700 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 TOP1P11387 765 aaKnown RBP12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 AKR1A1P14550 325 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 GSPT1P15170 499 aaKnown RBP12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 BMP8BP34820 402 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 SLC4A3P48751 1232 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 LRRC41Q15345 812 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 CCDC96Q2M329 555 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 TKFCQ3LXA3 575 aa12.34□□□□□ -0.43
HMGXB3-205ENST00000514469 MFSD6Q6ZSS7 791 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms